RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 DRD4P21917 467 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 MAP4P27816 1152 aaKnown RBP10.6□□□□□ -0.71
SHMT2-218ENST00000555213 ACADLP28330 430 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 ALDH3A1P30838 453 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 SHMT2P34897 504 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 CAPZBP47756 277 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 OR1D5P58170 312 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 INSM1Q01101 510 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-218ENST00000555213 ABRQ12979 859 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 PRKAA1Q13131 559 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 SP140Q13342 867 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 GBX1Q14549 363 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 PCLAFQ15004 111 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 PDK4Q16654 411 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 HES3Q5TGS1 186 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 HHATQ5VTY9 493 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 RAPH1Q70E73 1250 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 CCDC91Q7Z6B0 441 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 SLCO6A1Q86UG4 719 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 LCA5Q86VQ0 697 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 OOSP2Q86WS3 158 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 TMPRSS12Q86WS5 348 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 VRK3Q8IV63 474 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 LRRC34Q8IZ02 419 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 OR5AR1Q8NGP9 310 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 PTERQ96BW5 349 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 LINGO1Q96FE5 620 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 PAIP2Q9BPZ3 127 aaKnown RBP10.6□□□□□ -0.71
SHMT2-218ENST00000555213 MECRQ9BV79 373 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 RAB11FIP5Q9BXF6 653 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 UNKQ9C0B0 810 aaKnown RBP10.6□□□□□ -0.71
SHMT2-218ENST00000555213 C20orf27Q9GZN8 174 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 EPN3Q9H201 632 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 SRMSQ9H3Y6 488 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 ZNF395Q9H8N7 513 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-218ENST00000555213 NMRAL1Q9HBL8 299 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 GPAMQ9HCL2 828 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 TDRKHQ9Y2W6 561 aaKnown RBP10.6□□□□□ -0.71
SHMT2-218ENST00000555213 TCP11X1B4DZS4 312 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 MATN2O00339 956 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 PROS1P07225 676 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 C8GP07360 202 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 LTA4HP09960 611 aaKnown RBP10.59□□□□□ -0.71
SHMT2-218ENST00000555213 FGF3P11487 239 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-218ENST00000555213 ZNF37AP17032 561 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-218ENST00000555213 BGNP21810 368 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 ARRB2P32121 409 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 CCL7P80098 99 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 GABPB1Q06547 395 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-218ENST00000555213 FOXC1Q12948 553 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 PRKG2Q13237 762 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 CSHL1Q14406 222 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 CCDC153Q494R4 210 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 TAF1BQ53T94 588 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-218ENST00000555213 CGB2Q6NT52 195 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 WDR74Q6RFH5 385 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-218ENST00000555213 PLXDC1Q8IUK5 500 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 NKAPQ8N5F7 415 aaKnown RBP10.59□□□□□ -0.71
SHMT2-218ENST00000555213 PHC3Q8NDX5 983 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 OR52E1Q8NGJ3 308 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 EEF1AKMT1Q8WVE0 214 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 RAD51AP1Q96B01 352 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 GRAMD1AQ96CP6 724 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 MOCOSQ96EN8 888 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 ZDHHC12Q96GR4 267 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 PDLIM5Q96HC4 596 aaKnown RBP10.59□□□□□ -0.71
SHMT2-218ENST00000555213 TMEM74Q96NL1 305 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 CCT8L2Q96SF2 557 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 TBC1D10AQ9BXI6 508 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 STRADBQ9C0K7 418 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 TFB2MQ9H5Q4 396 aaKnown RBP10.59□□□□□ -0.71
SHMT2-218ENST00000555213 COPG2Q9UBF2 871 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 CLCA2Q9UQC9 943 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 ARHGEF17Q96PE2 2063 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-218ENST00000555213 PIKFYVEQ9Y2I7 2098 aa10.59□□□□□ -0.71
SHMT2-218ENST00000555213 A0A1W2PQM1 296 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 ZNF839A8K0R7 811 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 NTN3O00634 580 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-218ENST00000555213 KLF11O14901 512 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 B4GAT1O43505 415 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 ZBTB14O43829 449 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 DLX3O60479 287 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 MATN4O95460 622 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 C1orf105O95561 183 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 MT-CO3P00414 261 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 MTHFD2P13995 350 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 JUPP14923 745 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 CPA3P15088 417 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 TYRP1P17643 537 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 CYP2A7P20853 494 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 CD1CP29017 333 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 BDKRB1P46663 353 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 GLRBP48167 497 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 RAB28P51157 221 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 SQSTM1Q13501 440 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 ACAP2Q15057 778 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 OR4D1Q15615 310 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 TECRLQ5HYJ1 363 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 NKAIN2Q5VXU1 208 aa10.58□□□□□ -0.72
SHMT2-218ENST00000555213 PIWIL4Q7Z3Z4 852 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms