RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 PRPS2P11908 318 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 UGT1A1P22309 533 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 UGT1A4P22310 534 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 GKP32189 559 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 UGT1A3P35503 534 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 UGT1A5P35504 534 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 RGS4P49798 205 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 HENMT1Q5T8I9 393 aaKnown RBP12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 LRRC66Q68CR7 880 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 TSEN54Q7Z6J9 526 aaKnown RBP12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 MICU2Q8IYU8 434 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 ZCCHC7Q8N3Z6 543 aaKnown RBP12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 FBXO15Q8NCQ5 510 aaPredicted RBP12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 DDHD1Q8NEL9 900 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 HIC2Q96JB3 615 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 PPM1MQ96MI6 270 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 DACH2Q96NX9 599 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 BTBD2Q9BX70 525 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 PARVBQ9HBI1 364 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 OPTCQ9UBM4 332 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 TEX28O15482 410 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 PRMT3O60678 531 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 CLIC3O95833 236 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 CDKN2CP42773 168 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 FAM174BQ3ZCQ3 159 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 C22orf39Q6P5X5 142 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 TAS2R42Q7RTR8 314 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 PTOV1Q86YD1 416 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 ELMOD1Q8N336 334 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 MUL1Q969V5 352 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 ZNF490Q9ULM2 529 aaPredicted RBP12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 CDC14AQ9UNH5 594 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 IRAK3Q9Y616 596 aa12.28□□□□□ -0.44
PPP4R3A-206ENST00000554943 A0A0J9YVX5 310 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 A0A1W2PQ67 120 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 YY2O15391 372 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 LILRB5O75023 590 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 STK16O75716 305 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 AP2A2O94973 939 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 IRF1P10914 325 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 MATN1P21941 496 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 SHQ1Q6PI26 577 aaKnown RBP12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 MBOAT1Q6ZNC8 495 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 TECPR1Q7Z6L1 1165 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 LRRC56Q8IYG6 542 aaPredicted RBP12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 KIAA1958Q8N8K9 716 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 OR2T12Q8NG77 320 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 GOT1L1Q8NHS2 421 aaPredicted RBP12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 RAET1EQ8TD07 263 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 UGT2B28Q9BY64 529 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 IFT80Q9P2H3 777 aaPredicted RBP12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 TSC22D4Q9Y3Q8 395 aa12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 MAGED1Q9Y5V3 778 aaPredicted RBP12.27□□□□□ -0.44
PPP4R3A-206ENST00000554943 SPINT1O43278 529 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 C1QCP02747 245 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 DCTP40126 519 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 RPL38P63173 70 aaKnown RBP12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 CSTF3Q12996 717 aaKnown RBP12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 RPS6KA2Q15349 733 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 NR6A1Q15406 480 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 HKDC1Q2TB90 917 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 MAP7D1Q3KQU3 841 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 TMEM215Q68D42 235 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 KDM4DQ6B0I6 523 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 LAIR1Q6GTX8 287 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 Q6ZNX1 250 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 LINC00299Q6ZSB3 139 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 RFLNAQ6ZTI6 216 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 LPCAT2Q7L5N7 544 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 SYNPOQ8N3V7 929 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 NETO1Q8TDF5 533 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 PSD2Q9BQI7 771 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 GULP1Q9UBP9 304 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 EXO1Q9UQ84 846 aaKnown RBP12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 EIF3LQ9Y262 564 aaKnown RBP12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 PCDHGA8Q9Y5G5 932 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 MYOFQ9NZM1 2061 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 ELOVL7A1L3X0 281 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 H0YIV9 168 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 TMX2-CTNND1H3BSU7 103 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 CXCR6O00574 342 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 ABCB7O75027 752 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 ULK1O75385 1050 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 IGSF6O95976 241 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 THRBP10828 461 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 JUPP14923 745 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 EPHB3P54753 998 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 CREMQ03060 361 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 EPS8Q12929 822 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 AP1ARQ63HQ0 302 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 CPZQ66K79 652 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 TTC33Q6PID6 262 aaPredicted RBP12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 PPWD1Q96BP3 646 aaKnown RBP12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 DOCK6Q96HP0 2047 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 SUV39H2Q9H5I1 410 aa12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 HEMK1Q9Y5R4 338 aaPredicted RBP12.27□□□□□ -0.45
PPP4R3A-206ENST00000554943 AXIN1O15169 862 aa12.26□□□□□ -0.45
PPP4R3A-206ENST00000554943 TGM5O43548 720 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms