RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 KCNE4Q8WWG9 221 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 UBXN4Q92575 508 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 LINGO1Q96FE5 620 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 HS3ST6Q96QI5 342 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 CD180Q99467 661 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 PKP4Q99569 1192 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 RHOXF2Q9BQY4 288 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 DDA1Q9BW61 102 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 PITPNM3Q9BZ71 974 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 SPRY4Q9C004 299 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 PHACTR1Q9C0D0 580 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 L2HGDHQ9H9P8 463 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 CAB39LQ9H9S4 337 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 FBXO8Q9NRD0 319 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 FAM114A2Q9NRY5 505 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 OR6C2Q9NZP2 312 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 KLHL42Q9P2K6 505 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 MTO1Q9Y2Z2 717 aaKnown RBP11.94□□□□□ -0.5
SYNE2-214ENST00000554928 VWA7Q9Y334 891 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 PCDHGA3Q9Y5H0 932 aa11.94□□□□□ -0.5
SYNE2-214ENST00000554928 PKD1L2Q7Z442 2459 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 FAM95CA0A1B0GW59 222 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 C2orf74A8MZ97 194 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 ISM1B1AKI9 464 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 GFYI3L273 518 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 MYO1CO00159 1063 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 KLK10O43240 276 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 EFSO43281 561 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 PRICKLE3O43900 615 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-214ENST00000554928 MPC1LP0DKB6 136 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 TLE3Q04726 772 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 DEFB110Q30KQ9 67 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 TTLL9Q3SXZ7 439 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 CDHR3Q6ZTQ4 885 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 NEK10Q6ZWH5 1172 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 VASH2Q86V25 355 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 SLC26A11Q86WA9 606 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 DTX1Q86Y01 620 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 GSPT2Q8IYD1 628 aaKnown RBP11.93□□□□□ -0.5
SYNE2-214ENST00000554928 PPFIBP2Q8ND30 876 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 ZNF248Q8NDW4 579 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 OR2L8Q8NGY9 312 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 ASB11Q8WXH4 323 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 RAD51AP1Q96B01 352 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 VPS39Q96JC1 886 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 C1GALT1Q9NS00 363 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 TAS2R13Q9NYV9 303 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 ACSL6Q9UKU0 697 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 BTRCQ9Y297 605 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 KMT2BQ9UMN6 2715 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-214ENST00000554928 AHCTF1Q8WYP5 2266 aa11.93□□□□□ -0.5
SYNE2-214ENST00000554928 ANKRD11Q6UB99 2663 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-214ENST00000554928 SDK2Q58EX2 2172 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 POLR1CO15160 346 aaPredicted RBP11.92□□□□□ -0.5
SYNE2-214ENST00000554928 ZBTB11O95625 1053 aaPredicted RBP11.92□□□□□ -0.5
SYNE2-214ENST00000554928 DLGAP3O95886 979 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 RPN2P04844 631 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 ERGP11308 486 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 GABRA4P48169 554 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 HSD11B2P80365 405 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 TUBB3Q13509 450 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 CYP2A13Q16696 494 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 PHKG1Q16816 387 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 ZXDCQ2QGD7 858 aaPredicted RBP11.92□□□□□ -0.5
SYNE2-214ENST00000554928 COL28A1Q2UY09 1125 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 GLE1Q53GS7 698 aaKnown RBP11.92□□□□□ -0.5
SYNE2-214ENST00000554928 DCAF12Q5T6F0 453 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 KIAA1614Q5VZ46 1190 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 FAM45BPQ6NSW5 357 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 PWWP2BQ6NUJ5 590 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 SUSD1Q6UWL2 747 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 UBE2R2Q712K3 238 aaPredicted RBP11.92□□□□□ -0.5
SYNE2-214ENST00000554928 PPM1NQ8N819 430 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 OR9A1PQ8NGU1 263 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 FAM45AQ8TCE6 357 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 ANKRD49Q8WVL7 239 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 ZNF501Q96CX3 271 aaPredicted RBP11.92□□□□□ -0.5
SYNE2-214ENST00000554928 MRRFQ96E11 262 aaKnown RBP11.92□□□□□ -0.5
SYNE2-214ENST00000554928 FOPNLQ96NB1 174 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 UNKQ9C0B0 810 aaKnown RBP11.92□□□□□ -0.5
SYNE2-214ENST00000554928 CDC42EP4Q9H3Q1 356 aaKnown RBP11.92□□□□□ -0.5
SYNE2-214ENST00000554928 RHOJQ9H4E5 214 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 FGF21Q9NSA1 209 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 WDR70Q9NW82 654 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 SOHLH2Q9NX45 425 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 SLC39A10Q9ULF5 831 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 NFU1Q9UMS0 254 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 PDE10AQ9Y233 779 aa11.92□□□□□ -0.5
SYNE2-214ENST00000554928 A0A0J9YY10 115 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 MATN2O00339 956 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 PHGDHO43175 533 aaKnown RBP11.91□□□□□ -0.5
SYNE2-214ENST00000554928 SPAG6O75602 509 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 STK17BO94768 372 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 KIAA0754O94854 1291 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 WISP3O95389 354 aaPredicted RBP11.91□□□□□ -0.5
SYNE2-214ENST00000554928 SLC16A8O95907 504 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 SYF2O95926 243 aaKnown RBP11.91□□□□□ -0.5
SYNE2-214ENST00000554928 CATP04040 527 aaKnown RBP11.91□□□□□ -0.5
SYNE2-214ENST00000554928 GSTA2P09210 222 aa11.91□□□□□ -0.5
SYNE2-214ENST00000554928 FAM153BP0C7A2 387 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms