RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SLMAPQ14BN4 828 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 UAP1Q16222 522 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-212ENST00000554486 KYNUQ16719 465 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 BEND6Q5SZJ8 279 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-212ENST00000554486 ERAP2Q6P179 960 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 EMBQ6PCB8 327 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 NLRP9Q7RTR0 991 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 TECPR1Q7Z6L1 1165 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 KBTBD6Q86V97 674 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 TAX1BP1Q86VP1 789 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 CMTM4Q8IZR5 234 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 PRR18Q8N4B5 295 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 CAMKK1Q8N5S9 505 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 FRMD1Q8N878 549 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 OR4K2Q8NGD2 314 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 OR13C4Q8NGS5 318 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 RLN3Q8WXF3 142 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 PEX13Q92968 403 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 HDAC10Q969S8 669 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 CFAP36Q96G28 342 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 TBATAQ96M53 351 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 NAT9Q9BTE0 207 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 ADI1Q9BV57 179 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 TPSD1Q9BZJ3 242 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 GPR63Q9BZJ6 419 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 PREBQ9HCU5 417 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 BPIFA1Q9NP55 256 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 NLE1Q9NVX2 485 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-212ENST00000554486 BCCIPQ9P287 314 aaKnown RBP eCLIP6.23□□□□□ -1.41
SCFD1-212ENST00000554486 NCKAP1Q9Y2A7 1128 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 MYRFQ9Y2G1 1151 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 RPS6KL1Q9Y6S9 549 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 FAM169AQ9Y6X4 670 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 PIKFYVEQ9Y2I7 2098 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 THADAQ6YHU6 1953 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 IGHV1OR15-9A0A0B4J2B8 117 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 UBE2QL1A1L167 161 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 CCDC162PA2VCL2 907 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 PRR23AA6NEV1 266 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 OR51F1A6NGY5 319 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 FAM47DPA6NHR8 397 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 H7C0S8 307 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 PSMD11O00231 422 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 STX7O15400 261 aaKnown RBP6.22□□□□□ -1.41
SCFD1-212ENST00000554486 RIPK2O43353 540 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 CDC14BO60729 498 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 ZNF217O75362 1048 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 ITGA10O75578 1167 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 RPP40O75818 363 aaKnown RBP6.22□□□□□ -1.41
SCFD1-212ENST00000554486 RECQL5O94762 991 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-212ENST00000554486 ACSL3O95573 720 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 SEMA4FO95754 770 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 IL33O95760 270 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 C1QAP02745 245 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 POLBP06746 335 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 GSTA2P09210 222 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 ELFN1P0C7U0 828 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 TSHRP16473 764 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 NFKBIAP25963 317 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 AVPR2P30518 371 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 CA5AP35218 305 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 HMGCLP35914 325 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 HSD17B3P37058 310 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 XIAPP98170 497 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 PDE1BQ01064 536 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 CREB5Q02930 508 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 PEX6Q13608 980 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 IL10RAQ13651 578 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 ARHGEF7Q14155 803 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 FRG1Q14331 258 aaKnown RBP6.22□□□□□ -1.41
SCFD1-212ENST00000554486 SMAD1Q15797 465 aaKnown RBP6.22□□□□□ -1.41
SCFD1-212ENST00000554486 ZNF284Q2VY69 593 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 MAP9Q49MG5 647 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 SPANXN3Q5MJ09 141 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 SEL1L3Q68CR1 1132 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 KIAA0930Q6ICG6 404 aaPredicted RBP6.22□□□□□ -1.41
SCFD1-212ENST00000554486 NEK5Q6P3R8 708 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 FBXO38Q6PIJ6 1188 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 TSSK4Q6SA08 328 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 C3orf62Q6ZUJ4 267 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 TRMT10CQ7L0Y3 403 aaKnown RBP6.22□□□□□ -1.41
SCFD1-212ENST00000554486 WDR5BQ86VZ2 330 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 HORMAD1Q86X24 394 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 C1orf210Q8IVY1 113 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 PALM2Q8IXS6 379 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 PELI3Q8N2H9 469 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 MREGQ8N565 214 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 GPR26Q8NDV2 337 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 OR2T34Q8NGX1 318 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 GSDMBQ8TAX9 411 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 CXorf40AQ8TE69 158 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 KLK6Q92876 244 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 DTD2Q96FN9 168 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 CDKN2AIPNLQ96HQ2 116 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 C8orf49Q96NF6 230 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 TTC25Q96NG3 672 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 C19orf43Q9BQ61 176 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 FUT8Q9BYC5 575 aa6.22□□□□□ -1.41
SCFD1-212ENST00000554486 BTBD1Q9H0C5 482 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms