RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 IGLV3-16A0A075B6K0 115 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 ANGPT2O15123 496 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 NFATC1O95644 943 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 IL12AP29459 219 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 ADGRE1Q14246 886 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 ZNF284Q2VY69 593 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 ATP6AP1LQ52LC2 224 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 CLHC1Q8NHS4 586 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 ULK4Q96C45 1275 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 GPATCH1Q9BRR8 931 aaKnown RBP11.4□□□□□ -0.58
SHMT2-212ENST00000554467 TSC22D4Q9Y3Q8 395 aa11.4□□□□□ -0.58
SHMT2-212ENST00000554467 TNPO3Q9Y5L0 923 aaKnown RBP11.4□□□□□ -0.58
SHMT2-212ENST00000554467 SH3BGRLO75368 114 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 STK16O75716 305 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 ATE1O95260 518 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 CAPNS1P04632 268 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 EPHX1P07099 455 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 FCARP24071 287 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 IL12RB1P42701 662 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 PSMD8P48556 350 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 MAPRE2Q15555 327 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 ERAP2Q6P179 960 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 IFNEQ86WN2 208 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 CHERPQ8IWX8 916 aaKnown RBP11.4□□□□□ -0.59
SHMT2-212ENST00000554467 RAVER1Q8IY67 606 aaKnown RBP11.4□□□□□ -0.59
SHMT2-212ENST00000554467 ZNF557Q8N988 423 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-212ENST00000554467 DNAJB14Q8TBM8 379 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 STON2Q8WXE9 905 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 TANKQ92844 425 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 PRM3Q9NNZ6 103 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 SDR39U1Q9NRG7 319 aaPredicted RBP11.4□□□□□ -0.59
SHMT2-212ENST00000554467 CROTQ9UKG9 612 aa11.4□□□□□ -0.59
SHMT2-212ENST00000554467 KNL1Q8NG31 2342 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 OTCP00480 354 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 G6PDP11413 515 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 SLC2A4P14672 509 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 ZNF30P17039 623 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 PDHA2P29803 388 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 RCVRNP35243 200 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 DGKQP52824 942 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 RPL38P63173 70 aaKnown RBP11.39□□□□□ -0.59
SHMT2-212ENST00000554467 PTGR1Q14914 329 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 AP5B1Q2VPB7 878 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 PAGE3Q5JUK9 113 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 SULT1C3Q6IMI6 304 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 XKR5Q6UX68 686 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 DPPA4Q7L190 304 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 FAM110BQ8TC76 370 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 PLEKHA8Q96JA3 519 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 TPK1Q9H3S4 243 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 OLAHQ9NV23 265 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 EGFL7Q9UHF1 273 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 KIF26AQ9ULI4 1882 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-212ENST00000554467 CDC14AQ9UNH5 594 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 AURKCQ9UQB9 309 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 SLC22A14Q9Y267 594 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 V9GYQ6 96 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 ASPDHA6ND91 283 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 PLOD2O00469 737 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 RSL1D1O76021 490 aaKnown RBP11.39□□□□□ -0.59
SHMT2-212ENST00000554467 WDR47O94967 919 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 ZBTB11O95625 1053 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-212ENST00000554467 SRPRAP08240 638 aaKnown RBP11.39□□□□□ -0.59
SHMT2-212ENST00000554467 EPORP19235 508 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 TMED10P49755 219 aaKnown RBP11.39□□□□□ -0.59
SHMT2-212ENST00000554467 TSTA3Q13630 321 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-212ENST00000554467 HNRNPA1L2Q32P51 320 aaKnown RBP11.39□□□□□ -0.59
SHMT2-212ENST00000554467 PTCHD3Q3KNS1 767 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 IL23RQ5VWK5 629 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 PDE12Q6L8Q7 609 aaKnown RBP11.39□□□□□ -0.59
SHMT2-212ENST00000554467 TECPR1Q7Z6L1 1165 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 GPR180Q86V85 440 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 SLC22A15Q8IZD6 547 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 ISOC1Q96CN7 298 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 Q9H521 79 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 ACTR8Q9H981 624 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 AIG1Q9NVV5 245 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 THEGQ9P2T0 379 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 EPS15L1Q9UBC2 864 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 HCN2Q9UL51 889 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 RBMX2Q9Y388 322 aaKnown RBP11.39□□□□□ -0.59
SHMT2-212ENST00000554467 CORINQ9Y5Q5 1042 aa11.39□□□□□ -0.59
SHMT2-212ENST00000554467 NUP214P35658 2090 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 LRRK1Q38SD2 2015 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 A0A1W2PQ67 120 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 RECQL5O94762 991 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 ANXA5P08758 320 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 EPB42P16452 691 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 ZNF26P17031 533 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-212ENST00000554467 BDKRB1P46663 353 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 ATP1A4Q13733 1029 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 SYTL3Q4VX76 610 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 RABL3Q5HYI8 236 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 EGFLAMQ63HQ2 1017 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 TMEM220Q6QAJ8 160 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 TRIML2Q8N7C3 387 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 TBC1D15Q8TC07 691 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 FGF14Q92915 247 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 GLYATL1Q969I3 302 aa11.38□□□□□ -0.59
SHMT2-212ENST00000554467 C12orf43Q96C57 262 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms