RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 ABCC1P33527 1531 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 CDK13Q14004 1512 aaKnown RBP4.8□□□□□ -1.64
CHD8-207ENST00000554384 STRCP1A6NGW2 1772 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 NUP153P49790 1475 aaKnown RBP4.8□□□□□ -1.64
CHD8-207ENST00000554384 ABCA6Q8N139 1617 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 TNRQ92752 1358 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 A0A1W2PPI3 338 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 A0A1W2PS18 150 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 GAPDHSO14556 408 aaPredicted RBP4.79□□□□□ -1.64
CHD8-207ENST00000554384 ACOT8O14734 319 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 BUB3O43684 328 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 TBCAO75347 108 aaKnown RBP4.79□□□□□ -1.64
CHD8-207ENST00000554384 PDE9AO76083 593 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 CETPP11597 493 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 ZNF23P17027 643 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 MARK3P27448 753 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 GP5P40197 560 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 TERF1P54274 439 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 CDH11P55287 796 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 B3GALT5-AS1P59052 145 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 RPS18P62269 152 aaKnown RBP4.79□□□□□ -1.64
CHD8-207ENST00000554384 POU5F1Q01860 360 aaKnown RBP4.79□□□□□ -1.64
CHD8-207ENST00000554384 KIR2DS3Q14952 304 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 FAM76BQ5HYJ3 339 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 ERN2Q76MJ5 926 aaKnown RBP4.79□□□□□ -1.64
CHD8-207ENST00000554384 ANKRD23Q86SG2 305 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 GLRX5Q86SX6 157 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 FOXP4Q8IVH2 680 aaPredicted RBP4.79□□□□□ -1.64
CHD8-207ENST00000554384 DNAJC22Q8N4W6 341 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 DMBX1Q8NFW5 382 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 ZNF473Q8WTR7 871 aaKnown RBP4.79□□□□□ -1.64
CHD8-207ENST00000554384 ROBO4Q8WZ75 1007 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 EXT2Q93063 718 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 ARRDC1-AS1Q9H2J1 176 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 OLFML3Q9NRN5 406 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 TBC1D7Q9P0N9 293 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 TAAR2Q9P1P5 351 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 DAPK2Q9UIK4 370 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 CPSF3Q9UKF6 684 aaKnown RBP4.79□□□□□ -1.64
CHD8-207ENST00000554384 TMED3Q9Y3Q3 217 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 LRP5O75197 1615 aa4.79□□□□□ -1.64
CHD8-207ENST00000554384 A0A1W2PRB8 838 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 DENND3A2RUS2 1198 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 NEMP2A6NFY4 417 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 CLIC2O15247 247 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 AP5Z1O43299 807 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 IGHV2-70P01814 119 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 SCG2P13521 617 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 PDGFRAP16234 1089 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 CX3CL1P78423 397 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 MAT1AQ00266 395 aaKnown RBP4.78□□□□□ -1.64
CHD8-207ENST00000554384 VEZF1Q14119 521 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 CA9Q16790 459 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 UGP2Q16851 508 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 ASPRV1Q53RT3 343 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 SPDYCQ5MJ68 293 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 MPP7Q5T2T1 576 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 HECTD3Q5T447 861 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 KIAA1161Q6NSJ0 714 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 ADCK2Q7Z695 626 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 TLK2Q86UE8 772 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 DCP1BQ8IZD4 617 aaKnown RBP4.78□□□□□ -1.64
CHD8-207ENST00000554384 LMNTD1Q8N9Z9 388 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 IQUBQ8NA54 791 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 NPEPL1Q8NDH3 523 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 OR11H4Q8NGC9 324 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 IRGQQ8WZA9 623 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 ST6GAL2Q96JF0 529 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 SPATA17Q96L03 361 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 GBP5Q96PP8 586 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 MYADMQ96S97 322 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 RAD9AQ99638 391 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 MGME1Q9BQP7 344 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 RTP3Q9BQQ7 232 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 DESI2Q9BSY9 194 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 TRMT61BQ9BVS5 477 aaKnown RBP4.78□□□□□ -1.64
CHD8-207ENST00000554384 FKRPQ9H9S5 495 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 UPF2Q9HAU5 1272 aaKnown RBP4.78□□□□□ -1.64
CHD8-207ENST00000554384 TCF7L2Q9NQB0 619 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 SYNMO15061 1565 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 REREQ9P2R6 1566 aa4.78□□□□□ -1.64
CHD8-207ENST00000554384 MED14O60244 1454 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 ARHGEF37A1IGU5 675 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 DUXAA6NLW8 204 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 PLOD2O00469 737 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 NR3C1P04150 777 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 LIMK1P53667 647 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 PITX1P78337 314 aaPredicted RBP4.77□□□□□ -1.65
CHD8-207ENST00000554384 ITGA7Q13683 1181 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 SCARB2Q14108 478 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 LBHQ53QV2 105 aaPredicted RBP4.77□□□□□ -1.65
CHD8-207ENST00000554384 TCTE1Q5JU00 501 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 DCAF10Q5QP82 559 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 PRR27Q6MZM9 219 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 GPALPP1Q8IXQ4 340 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 OR8H3Q8N146 312 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 THAP8Q8NA92 274 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 GRHL3Q8TE85 626 aa4.77□□□□□ -1.65
CHD8-207ENST00000554384 RAB3IPQ96QF0 476 aaPredicted RBP4.77□□□□□ -1.65
CHD8-207ENST00000554384 ADPGKQ9BRR6 497 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms