RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CEACAM7Q14002 265 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 SIM2Q14190 667 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 USP10Q14694 798 aaKnown RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 LPAL2Q16609 132 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ZNF829Q3KNS6 432 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 MGAT5BQ3V5L5 792 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ARL13AQ5H913 290 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 MTX3Q5HYI7 312 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 TMTC4Q5T4D3 741 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 KANK2Q63ZY3 851 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 KCTD11Q693B1 232 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 LRRC8EQ6NSJ5 796 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 TIGD7Q6NT04 549 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ESRP1Q6NXG1 681 aaKnown RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 PRSS55Q6UWB4 352 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 BEND5Q7L4P6 421 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 PID1Q7Z2X4 250 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ZC3HC1Q86WB0 502 aaKnown RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 DHFR2Q86XF0 187 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ZNF567Q8N184 647 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 SCML4Q8N228 414 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 METTL25Q8N6Q8 603 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 SMYD1Q8NB12 490 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 CCNYQ8ND76 341 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 HIPK4Q8NE63 616 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 OR2T34Q8NGX1 318 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 OR2T3Q8NH03 318 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ITFG1Q8TB96 612 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 PEX13Q92968 403 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 FATE1Q969F0 183 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ELSPBP1Q96BH3 223 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 FEM1CQ96JP0 617 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 B3GALT6Q96L58 329 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 AGAP3Q96P47 875 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 SLC2A13Q96QE2 648 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 NPY6RQ99463 290 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 DOK1Q99704 481 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 OLFM1Q99784 485 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 CLSTN3Q9BQT9 956 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 C1orf50Q9BV19 199 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 BTBD2Q9BX70 525 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 MINDY3Q9H8M7 445 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 COPS7BQ9H9Q2 264 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 MEAF6Q9HAF1 191 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 POPDC3Q9HBV1 291 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 PREBQ9HCU5 417 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 HEBP1Q9NRV9 189 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 C20orf96Q9NUD7 363 aaPredicted RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 DDX18Q9NVP1 670 aaKnown RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 THG1LQ9NWX6 298 aaKnown RBP5.83□□□□□ -1.48
VPS33B-203ENST00000554264 MIOSQ9NXC5 875 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ADA2Q9NZK5 511 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 HMGXB4Q9UGU5 601 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 GNPTGQ9UJJ9 305 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 APPL1Q9UKG1 709 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 AP3M1Q9Y2T2 418 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 SLC30A1Q9Y6M5 507 aa5.83□□□□□ -1.48
VPS33B-203ENST00000554264 ZFHX4Q86UP3 3567 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TRIM64BA6NI03 449 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 C16orf96A6NNT2 1141 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TARM1B6A8C7 271 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 UBDO15205 165 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TSPAN1O60635 241 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 GPC4O75487 556 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 PYGLP06737 847 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 PROS1P07225 676 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 HNRNPCP07910 306 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 ERVK-10P10266 1014 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 ETS2P15036 469 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 ATP6V1B1P15313 513 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 PORP16435 677 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 GOT1P17174 413 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 FASP25445 335 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 PTPN3P26045 913 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 DCKP27707 260 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 SLC5A2P31639 672 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 CXCL12P48061 93 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 GEMP55040 296 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TMBIM6P55061 237 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TPI1P60174 286 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 PHEXP78562 749 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 CD83Q01151 205 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 GRSF1Q12849 480 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 SLC10A2Q12908 348 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 NFATC3Q12968 1075 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 MTM1Q13496 603 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 FASTKQ14296 549 aaKnown RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 ACAP2Q15057 778 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 CA9Q16790 459 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 GLRA4Q5JXX5 417 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 FAM171A1Q5VUB5 890 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 NXNQ6DKJ4 435 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 KIAA0930Q6ICG6 404 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 LCN8Q6JVE9 175 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 C8orf82Q6P1X6 216 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 SLC27A1Q6PCB7 646 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TTC33Q6PID6 262 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 ABRAXAS1Q6UWZ7 409 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 Q6ZNX1 250 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 ZBTB49Q6ZSB9 765 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms