RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 RNF112Q9ULX5 631 aa17.48■□□□□ 0.39
PSEN1-208ENST00000553719 PLLPQ9Y342 182 aa17.48■□□□□ 0.39
PSEN1-208ENST00000553719 A0A1W2PPV9 198 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 A0A1W2PQM1 296 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 OR5K3A6NET4 321 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 E7ENX8 843 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 UBXN8O00124 270 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 PRICKLE3O43900 615 aaPredicted RBP17.47■□□□□ 0.39
PSEN1-208ENST00000553719 OPA1O60313 960 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 KDM1AO60341 852 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 UBXN7O94888 489 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 HIST1H2AGP0C0S8 130 aaPredicted RBP17.47■□□□□ 0.39
PSEN1-208ENST00000553719 HIST1H2ADP20671 130 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 CD1CP29017 333 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 PEBP1P30086 187 aaKnown RBP17.47■□□□□ 0.39
PSEN1-208ENST00000553719 HSD17B2P37059 387 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 OR1D5P58170 312 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 GPLD1P80108 840 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 TAP2Q03519 686 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 CFHR1Q03591 330 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 PLCL1Q15111 1095 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 ANKS6Q68DC2 871 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 FRA10AC1Q70Z53 315 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 KLHDC8AQ8IYD2 350 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 LMNTD1Q8N9Z9 388 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 OR4E2Q8NGC2 313 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 FLVCR1-AS1Q8TAF5 88 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 HIST1H2AHQ96KK5 128 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 HIST1H2AJQ99878 128 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 TMEM79Q9BSE2 394 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 H2AFJQ9BTM1 129 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 TRIM54Q9BYV2 358 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 RAB33BQ9H082 229 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 C12orf65Q9H3J6 166 aaKnown RBP17.47■□□□□ 0.39
PSEN1-208ENST00000553719 ARL15Q9NXU5 204 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 KCNK4Q9NYG8 393 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 GRID1Q9ULK0 1009 aa17.47■□□□□ 0.39
PSEN1-208ENST00000553719 SYCE1LA8MT33 242 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 NTN3O00634 580 aaPredicted RBP17.46■□□□□ 0.39
PSEN1-208ENST00000553719 TAPBPO15533 448 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 PRPF4O43172 522 aaKnown RBP eCLIP17.46■□□□□ 0.39
PSEN1-208ENST00000553719 SPAG7O75391 227 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 PROS1P07225 676 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 CSF2RBP32927 897 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 GGT5P36269 586 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 ETV4P43268 484 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 SLC6A12P48065 614 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 PNLIPRP1P54315 467 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 MAGOHP61326 146 aaKnown RBP17.46■□□□□ 0.39
PSEN1-208ENST00000553719 NFKB2Q00653 900 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 ILKQ13418 452 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 BIRC2Q13490 618 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 MPP2Q14168 576 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 FASTKQ14296 549 aaKnown RBP17.46■□□□□ 0.39
PSEN1-208ENST00000553719 TRIP6Q15654 476 aaKnown RBP17.46■□□□□ 0.39
PSEN1-208ENST00000553719 AGTRAPQ6RW13 159 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 OR56A3Q8NH54 315 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 TCP10LQ8TDR4 215 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 UBTD2Q8WUN7 234 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 SRMSQ9H3Y6 488 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 CPSF2Q9P2I0 782 aaKnown RBP17.46■□□□□ 0.39
PSEN1-208ENST00000553719 PTBP2Q9UKA9 531 aaKnown RBP17.46■□□□□ 0.39
PSEN1-208ENST00000553719 PCDHGA1Q9Y5H4 931 aa17.46■□□□□ 0.39
PSEN1-208ENST00000553719 CNOT1A5YKK6 2376 aaKnown RBP17.46■□□□□ 0.39
PSEN1-208ENST00000553719 DCHS1Q96JQ0 3298 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 G3V2L1 256 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 GUCA1CO95843 209 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 ANXA5P08758 320 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 CHRM5P08912 532 aaPredicted RBP17.45■□□□□ 0.38
PSEN1-208ENST00000553719 ALDH4A1P30038 563 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 HNMTP50135 292 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 CCDC153Q494R4 210 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 SULT1C3Q6IMI6 304 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 Q8N9G6 341 aaPredicted RBP17.45■□□□□ 0.38
PSEN1-208ENST00000553719 ATL1Q8WXF7 558 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 FAM122AQ96E09 287 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 SCYL1Q96KG9 808 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 SGPP1Q9BX95 441 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 ACBD3Q9H3P7 528 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 SLC32A1Q9H598 525 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 SPHK1Q9NYA1 384 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 SLC17A7Q9P2U7 560 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 EPHA6Q9UF33 1036 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 LNPEPQ9UIQ6 1025 aa17.45■□□□□ 0.38
PSEN1-208ENST00000553719 MN1Q10571 1320 aaPredicted RBP17.45■□□□□ 0.38
PSEN1-208ENST00000553719 OR6C74A6NCV1 312 aa17.44■□□□□ 0.38
PSEN1-208ENST00000553719 NCF1BA6NI72 391 aaPredicted RBP17.44■□□□□ 0.38
PSEN1-208ENST00000553719 A8MT66 165 aa17.44■□□□□ 0.38
PSEN1-208ENST00000553719 NCF1CA8MVU1 366 aaPredicted RBP17.44■□□□□ 0.38
PSEN1-208ENST00000553719 SUPT3HB4E1H0 165 aa17.44■□□□□ 0.38
PSEN1-208ENST00000553719 DUX1O43812 170 aa17.44■□□□□ 0.38
PSEN1-208ENST00000553719 SUPT3HO75486 399 aa17.44■□□□□ 0.38
PSEN1-208ENST00000553719 RFPL3O75679 317 aa17.44■□□□□ 0.38
PSEN1-208ENST00000553719 C9P02748 559 aa17.44■□□□□ 0.38
PSEN1-208ENST00000553719 RPLP0P05388 317 aaKnown RBP17.44■□□□□ 0.38
PSEN1-208ENST00000553719 NCF1P14598 390 aaPredicted RBP17.44■□□□□ 0.38
PSEN1-208ENST00000553719 RPA3P35244 121 aaPredicted RBP17.44■□□□□ 0.38
PSEN1-208ENST00000553719 SLC18A1P54219 525 aa17.44■□□□□ 0.38
PSEN1-208ENST00000553719 PPP1CAP62136 330 aa17.44■□□□□ 0.38
PSEN1-208ENST00000553719 TBPL1P62380 186 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms