RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CFAP99D6REC4 459 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 GFYI3L273 518 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 LEFTY2O00292 366 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 FFAR3O14843 346 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 GPR42O15529 346 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 PRMT3O60678 531 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 FGF18O76093 207 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 CYP2A7P20853 494 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 GDF5P43026 501 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 SLC6A12P48065 614 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 SPINT3P49223 89 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 RPS14P62263 151 aaKnown RBP12.6□□□□□ -0.39
SHMT2-205ENST00000553474 ABRQ12979 859 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 ATP13A5Q4VNC0 1218 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 CARD16Q5EG05 197 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 BRAT1Q6PJG6 821 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 UBE2R2Q712K3 238 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-205ENST00000553474 RTL10Q7L3V2 364 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 GPR149Q86SP6 731 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 RALGPS2Q86X27 583 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-205ENST00000553474 KLHL23Q8NBE8 558 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 CSGALNACT1Q8TDX6 532 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 ASB11Q8WXH4 323 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 VOPP1Q96AW1 172 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 TIFAQ96CG3 184 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 CCDC97Q96F63 343 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-205ENST00000553474 ITCHQ96J02 903 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 OR52E6Q96RD3 313 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 HBEGFQ99075 208 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 ELOVL6Q9H5J4 265 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 NTN4Q9HB63 628 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 ATXN10Q9UBB4 475 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-205ENST00000553474 MAPRE3Q9UPY8 281 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 PDE10AQ9Y233 779 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 INVSQ9Y283 1065 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 RWDD3Q9Y3V2 267 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 PCDHGA11Q9Y5H2 935 aa12.6□□□□□ -0.39
SHMT2-205ENST00000553474 UPK1AO00322 258 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 TGM5O43548 720 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 DFNA5O60443 496 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 RECQL5O94762 991 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-205ENST00000553474 CTSAP10619 480 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 CYP2A6P11509 494 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-205ENST00000553474 BCKDHAP12694 445 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 ATP1B2P14415 290 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-205ENST00000553474 CCR7P32248 378 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 CA5AP35218 305 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 BMPR1AP36894 532 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 HLCSP50747 726 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 CYP4F8P98187 520 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 BIRC2Q13490 618 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 SELPLGQ14242 412 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 SPANXN4Q5MJ08 99 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 ISLR2Q6UXK2 745 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 TSPAN33Q86UF1 283 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 ADHFE1Q8IWW8 467 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 MICU2Q8IYU8 434 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 ADGRG2Q8IZP9 1017 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 EID3Q8N140 333 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 OR10A6Q8NH74 314 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 MCOLN3Q8TDD5 553 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 SLC22A17Q8WUG5 538 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 STARD8Q92502 1023 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 BHMTQ93088 406 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 TBC1D20Q96BZ9 403 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 HHIPQ96QV1 700 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 FAM83CQ9BQN1 747 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 ZBP1Q9H171 429 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 KAT8Q9H7Z6 458 aaKnown RBP12.59□□□□□ -0.39
SHMT2-205ENST00000553474 TMEM9Q9P0T7 183 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 ADGRE2Q9UHX3 823 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 CHD9Q3L8U1 2897 aa12.59□□□□□ -0.39
SHMT2-205ENST00000553474 KCNE1BA0A087WTH5 132 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 A0A1B0GTW7 788 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 G3V2T6 193 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 CXCR6O00574 342 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 SCAMP3O14828 347 aaKnown RBP12.58□□□□□ -0.39
SHMT2-205ENST00000553474 WNT9AO14904 365 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 ADH1AP07327 375 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 THRBP10828 461 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 HLA-FP30511 346 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 GKP32189 559 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 S100A3P33764 101 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 MTHFRP42898 656 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 RPS6KA3P51812 740 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 B4GALNT1Q00973 533 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 HMGCS1Q01581 520 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 ABHD18Q0P651 414 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 RFX4Q33E94 735 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 RBM48Q5RL73 367 aaKnown RBP12.58□□□□□ -0.39
SHMT2-205ENST00000553474 LIPJQ5W064 366 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 LILRA6Q6PI73 481 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 DHRS4L2Q6PKH6 230 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 CALHM3Q86XJ0 350 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 BEND7Q8N7W2 519 aaPredicted RBP12.58□□□□□ -0.39
SHMT2-205ENST00000553474 PJA1Q8NG27 643 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 SELENOMQ8WWX9 145 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 FIG4Q92562 907 aa12.58□□□□□ -0.39
SHMT2-205ENST00000553474 TMBIM1Q969X1 311 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms