RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 VMP1Q96GC9 406 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 CCDC114Q96M63 670 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 MLPHQ9BV36 600 aaPredicted RBP4.79□□□□□ -1.64
SYNE2-210ENST00000553455 SLC2A11Q9BYW1 496 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 C2orf40Q9H1Z8 148 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 S1PR5Q9H228 398 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 TFB2MQ9H5Q4 396 aaKnown RBP4.79□□□□□ -1.64
SYNE2-210ENST00000553455 ZNF556Q9HAH1 456 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 LMAN1LQ9HAT1 526 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 WDR83OSQ9Y284 106 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 HEG1Q9ULI3 1381 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 C5orf52A6NGY3 159 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 H0YAE9 185 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 PLOD2O00469 737 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 XPNPEP2O43895 674 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 FGF5P12034 268 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 EPHA2P29317 976 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 TIA1P31483 386 aaKnown RBP eCLIP4.78□□□□□ -1.64
SYNE2-210ENST00000553455 CCKARP32238 428 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 MNDAP41218 407 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 NR2C2P49116 596 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 RRS1Q15050 365 aaKnown RBP4.78□□□□□ -1.64
SYNE2-210ENST00000553455 UGP2Q16851 508 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 ITPRIPL2Q3MIP1 535 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 SHEQ5VZ18 495 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 C11orf88Q6PI97 169 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 ENPP7Q6UWV6 458 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 TMEM182Q6ZP80 229 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-210ENST00000553455 PIWIL3Q7Z3Z3 882 aaKnown RBP4.78□□□□□ -1.64
SYNE2-210ENST00000553455 ZNF554Q86TJ5 538 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 MMD2Q8IY49 270 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 RFLNBQ8N5W9 214 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 C9orf106Q8NAJ2 232 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 OR13A1Q8NGR1 328 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 OR1J1Q8NGS3 322 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 HEXDCQ8WVB3 486 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 RAD54LQ92698 747 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 CD101Q93033 1021 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 ALG14Q96F25 216 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 ST6GAL2Q96JF0 529 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 FAM20AQ96MK3 541 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 ZBTB20Q9HC78 741 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-210ENST00000553455 ARGLU1Q9NWB6 273 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-210ENST00000553455 DDX43Q9NXZ2 648 aaKnown RBP4.78□□□□□ -1.64
SYNE2-210ENST00000553455 SLC7A7Q9UM01 511 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 FAF1Q9UNN5 650 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-210ENST00000553455 TRIM17Q9Y577 477 aa4.78□□□□□ -1.64
SYNE2-210ENST00000553455 DENND3A2RUS2 1198 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 A4D1N5 150 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 CASTOR2A6NHX0 329 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 DNM1LO00429 736 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 ATP6AP2O75787 350 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 GSRP00390 522 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 CETPP11597 493 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 ATP5DP30049 168 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 DVL1P1P54792 670 aaPredicted RBP4.77□□□□□ -1.65
SYNE2-210ENST00000553455 GSDMDP57764 484 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 ERVFC1-1P60608 527 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 LGALS3BPQ08380 585 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 DMP1Q13316 513 aaPredicted RBP4.77□□□□□ -1.65
SYNE2-210ENST00000553455 MEP1BQ16820 701 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 TYSND1Q2T9J0 566 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 FAM174BQ3ZCQ3 159 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 LACTB2Q53H82 288 aaPredicted RBP4.77□□□□□ -1.65
SYNE2-210ENST00000553455 NHSL2Q5HYW2 709 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 SFMBT2Q5VUG0 894 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 WBP2NLQ6ICG8 309 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 MSANTD1Q6ZTZ1 278 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 OTOAQ7RTW8 1153 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 SPATA21Q7Z572 469 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 EXOC3L1Q86VI1 746 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 ZNF843Q8N446 348 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 MAB21L3Q8N8X9 362 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 PIGBQ92521 554 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 HES6Q96HZ4 224 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 GTPBP2Q9BX10 602 aaKnown RBP4.77□□□□□ -1.65
SYNE2-210ENST00000553455 LAT2Q9GZY6 243 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 RETREG1Q9H6L5 497 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 COPS7BQ9H9Q2 264 aaPredicted RBP4.77□□□□□ -1.65
SYNE2-210ENST00000553455 SPHK1Q9NYA1 384 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 TAAR2Q9P1P5 351 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 ZDHHC2Q9UIJ5 367 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 ACAD8Q9UKU7 415 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 JRKLQ9Y4A0 524 aa4.77□□□□□ -1.65
SYNE2-210ENST00000553455 GREB1LQ9C091 1923 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-210ENST00000553455 DUXAA6NLW8 204 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 PSMA7O14818 248 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 BUB3O43684 328 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 TSHBP01222 138 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 NR3C1P04150 777 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 AMD1P17707 334 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 CA4P22748 312 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 CD27P26842 260 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 TCF7P36402 384 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-210ENST00000553455 DCTP40126 519 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 WNT5AP41221 380 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 CDH11P55287 796 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 ARL16Q0P5N6 197 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 TNK1Q13470 666 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 NFE2L1Q14494 772 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms