RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 OR1N1Q8NGS0 311 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 OR5K2Q8NHB8 316 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 ELMO1Q92556 727 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 CCDC120Q96HB5 630 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 TAAR6Q96RI8 345 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 TRIM56Q9BRZ2 755 aaKnown RBP8.71□□□□□ -1.02
SYNE2-209ENST00000553308 SLC26A1Q9H2B4 701 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 MRM3Q9HC36 420 aaKnown RBP8.71□□□□□ -1.02
SYNE2-209ENST00000553308 CUTCQ9NTM9 273 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 IFNKQ9P0W0 207 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 ITGB1BP2Q9UKP3 347 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 KLF2Q9Y5W3 355 aaPredicted RBP8.71□□□□□ -1.02
SYNE2-209ENST00000553308 APCP25054 2843 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 PDZD2O15018 2839 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 TRGV8A0A0C4DH27 118 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 BHMG1C9JSJ3 638 aaPredicted RBP8.7□□□□□ -1.02
SYNE2-209ENST00000553308 PSTPIP1O43586 416 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 AP2A1O95782 977 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 ONECUT2O95948 504 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 GSTM1P09488 218 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 HTR1EP28566 365 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 PKLRP30613 574 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 PTGER4P35408 488 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 GRIA3P42263 894 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 OR1D4P47884 311 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 ARSFP54793 590 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 TPM4P67936 248 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 ARG2P78540 354 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 GSTM4Q03013 218 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 KIR2DS3Q14952 304 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 ANKRD20A2Q5SQ80 823 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 ANKRD20A1Q5TYW2 823 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 ANKRD20A3Q5VUR7 823 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 CAVIN1Q6NZI2 390 aaKnown RBP8.7□□□□□ -1.02
SYNE2-209ENST00000553308 GFRALQ6UXV0 394 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 BNC2Q6ZN30 1099 aaPredicted RBP8.7□□□□□ -1.02
SYNE2-209ENST00000553308 BBS12Q6ZW61 710 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 MRGPRGQ86SM5 289 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 TAX1BP1Q86VP1 789 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 PRSS58Q8IYP2 241 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 C2orf73Q8N5S3 287 aaPredicted RBP8.7□□□□□ -1.02
SYNE2-209ENST00000553308 LINC01555Q8NAE3 123 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 NR4A3Q92570 626 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 C8orf44Q96CB5 159 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 LMF1Q96S06 567 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 DNAJC7Q99615 494 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 CHP1Q99653 195 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 C19orf43Q9BQ61 176 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 TBL1YQ9BQ87 522 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 CRB3Q9BUF7 120 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 HEMGNQ9BXL5 484 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 TRIM8Q9BZR9 551 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 ZNF160Q9HCG1 818 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 SEMA3GQ9NS98 782 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 PLA2G3Q9NZ20 509 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 SMARCAL1Q9NZC9 954 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 CIDEBQ9UHD4 219 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 POLG2Q9UHN1 485 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 SH3BGRL2Q9UJC5 107 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 NXT1Q9UKK6 140 aaKnown RBP8.7□□□□□ -1.02
SYNE2-209ENST00000553308 AAR2Q9Y312 384 aaKnown RBP8.7□□□□□ -1.02
SYNE2-209ENST00000553308 MAU2Q9Y6X3 613 aa8.7□□□□□ -1.02
SYNE2-209ENST00000553308 SLC5A10A0PJK1 596 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 MACROD2A1Z1Q3 448 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 OR51F1A6NGY5 319 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 VSTM2BA6NLU5 285 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 H7C0S8 307 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 APOC4-APOC2K7ER74 178 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 CCL21O00585 134 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 MAP2K7O14733 419 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 AP2A2O94973 939 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 UNC5CO95185 931 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 ZRANB2O95218 330 aaKnown RBP eCLIP8.69□□□□□ -1.02
SYNE2-209ENST00000553308 MED26O95402 600 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 HPP00738 406 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 F10P00742 488 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 APOC2P02655 101 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 FTH1P02794 183 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 PIM1P11309 404 aaPredicted RBP8.69□□□□□ -1.02
SYNE2-209ENST00000553308 COX6B1P14854 86 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 ACPPP15309 386 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 CSE1LP55060 971 aaKnown RBP8.69□□□□□ -1.02
SYNE2-209ENST00000553308 CACNG1Q06432 222 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 KLC1Q07866 573 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 PRPSAP1Q14558 356 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 GRM7Q14831 915 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 ZNF630Q2M218 657 aaPredicted RBP8.69□□□□□ -1.02
SYNE2-209ENST00000553308 SYTL3Q4VX76 610 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 NLRP9Q7RTR0 991 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 KATNAL2Q8IYT4 538 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 ZNF808Q8N4W9 903 aaPredicted RBP8.69□□□□□ -1.02
SYNE2-209ENST00000553308 OR8K1Q8NGG5 319 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 CCDC110Q8TBZ0 833 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 ACTL9Q8TC94 416 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 IL17FQ96PD4 163 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 FAM118BQ9BPY3 351 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 ANP32EQ9BTT0 268 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 MENTQ9BUN1 341 aa8.69□□□□□ -1.02
SYNE2-209ENST00000553308 NLE1Q9NVX2 485 aaPredicted RBP8.69□□□□□ -1.02
SYNE2-209ENST00000553308 PTGFRNQ9P2B2 879 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms