RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CSF2RBP32927 897 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 RPA3P35244 121 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 GRK3P35626 688 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 PMS2P54278 862 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 RAB10P61026 200 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 CDKL1Q00532 357 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 MAP7Q14244 749 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 SF1Q15637 639 aaKnown RBP9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 TCTE1Q5JU00 501 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 SNAP47Q5SQN1 464 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 YOD1Q5VVQ6 348 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 ZNF549Q6P9A3 640 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 EMBQ6PCB8 327 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 FBXO38Q6PIJ6 1188 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 CAPN12Q6ZSI9 719 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 RAPH1Q70E73 1250 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 FRA10AC1Q70Z53 315 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 CROCCP2Q86T23 111 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 PPP1R3BQ86XI6 285 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 ZNF761Q86XN6 746 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 SYTL1Q8IYJ3 562 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 D2HGDHQ8N465 521 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 LMNTD1Q8N9Z9 388 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 ZSCAN1Q8NBB4 408 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 ZCCHC14Q8WYQ9 949 aaKnown RBP9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 RSC1A1Q92681 617 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 LINGO1Q96FE5 620 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 PWWP2AQ96N64 755 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 MIPEPQ99797 713 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 DPH2Q9BQC3 489 aaPredicted RBP9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 TRIM56Q9BRZ2 755 aaKnown RBP9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 HAUS8Q9BT25 410 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 DERL2Q9GZP9 239 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 PISDQ9UG56 409 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 TMCO1Q9UM00 188 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 NFU1Q9UMS0 254 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 SNX7Q9UNH6 387 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 ACOT9Q9Y305 439 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 KLK4Q9Y5K2 254 aa9.94□□□□□ -0.82
TRAFD1-208ENST00000552890 IQANK1A0A1B0GTG1 560 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 EXOC1LA0A1B0GW35 172 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 CDRT15L2A8MXV6 281 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 BRINP1O60477 761 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 SRPX2O60687 465 aaPredicted RBP9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 MPOP05164 745 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 ANXA5P08758 320 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 CCNYL3P0C7X3 344 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 FGF5P12034 268 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 HOXB3P14651 431 aaPredicted RBP9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 GABRB3P28472 473 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 SERPINB8P50452 374 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 PNLIPRP1P54315 467 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 GPX6P59796 221 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 SKP1P63208 163 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 CYP4F3Q08477 520 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 ZNF789Q5FWF6 425 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 CAPN13Q6MZZ7 669 aaPredicted RBP9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 METTL2BQ6P1Q9 378 aaKnown RBP9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 WDR93Q6P2C0 686 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 FOXR1Q6PIV2 292 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 PAQR3Q6TCH7 311 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 ZNF574Q6ZN55 896 aaPredicted RBP9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 FAM92BQ6ZTR7 304 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 B3GNT8Q7Z7M8 397 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 VRK3Q8IV63 474 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 SFTPA2Q8IWL1 248 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 CPNE9Q8IYJ1 553 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 ADGRF3Q8IZF5 1079 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 UNC5BQ8IZJ1 945 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 ZNF655Q8N720 491 aaPredicted RBP9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 STAG3L4Q8TBR4 150 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 EEF1AKMT1Q8WVE0 214 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 DLG3Q92796 817 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 KIAA1143Q96AT1 154 aaPredicted RBP9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 NDNQ99608 321 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 WDR83Q9BRX9 315 aaKnown RBP9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 NLNQ9BYT8 704 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 SLC7A5P2Q9GIP4 190 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 CDC42EP4Q9H3Q1 356 aaKnown RBP9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 CCDC177Q9NQR7 707 aaPredicted RBP9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 ARL15Q9NXU5 204 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 NINJ2Q9NZG7 142 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 OGFRQ9NZT2 677 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 CTNNAL1Q9UBT7 734 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 KLHL3Q9UH77 587 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 SRPK3Q9UPE1 567 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 ICKQ9UPZ9 632 aa9.93□□□□□ -0.82
TRAFD1-208ENST00000552890 BPTFQ12830 3046 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 A8MU76 341 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 BTN3A1O00481 513 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 ACSL3O95573 720 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 SYF2O95926 243 aaKnown RBP9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 KLK3P07288 261 aaPredicted RBP9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 SNRPAP09012 282 aaKnown RBP9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 ATXN8OSP0DMR3 200 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 LIPCP11150 499 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 ERGP11308 486 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 PIM1P11309 404 aaPredicted RBP9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 UGT2B7P16662 529 aa9.92□□□□□ -0.82
TRAFD1-208ENST00000552890 SAT1P21673 171 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms