RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 CXXC4Q9H2H0 198 aa10.92□□□□□ -0.66
SUPT16H-202ENST00000552829 MRM3Q9HC36 420 aaKnown RBP10.92□□□□□ -0.66
SUPT16H-202ENST00000552829 SEMA3GQ9NS98 782 aa10.92□□□□□ -0.66
SUPT16H-202ENST00000552829 SMOXQ9NWM0 555 aa10.92□□□□□ -0.66
SUPT16H-202ENST00000552829 ACTR10Q9NZ32 417 aa10.92□□□□□ -0.66
SUPT16H-202ENST00000552829 CTTNBP2NLQ9P2B4 639 aa10.92□□□□□ -0.66
SUPT16H-202ENST00000552829 SEC14L3Q9UDX4 400 aa10.92□□□□□ -0.66
SUPT16H-202ENST00000552829 CDC23Q9UJX2 597 aa10.92□□□□□ -0.66
SUPT16H-202ENST00000552829 SCINQ9Y6U3 715 aa10.92□□□□□ -0.66
SUPT16H-202ENST00000552829 A0A0A6YYK5 440 aaPredicted RBP10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 C2orf74A8MZ97 194 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 SLC19A2O60779 497 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 MT-CYBP00156 380 aaPredicted RBP10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 CRYABP02511 175 aaKnown RBP10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 MX2P20592 715 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 TMPRSS15P98073 1019 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 PPIDQ08752 370 aaKnown RBP10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 PIGHQ14442 188 aaPredicted RBP10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 KRT81Q14533 505 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 LONRF1Q17RB8 773 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 LONRF2Q1L5Z9 754 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 ZNF658BQ4V348 819 aaPredicted RBP10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 BCL7AQ4VC05 210 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 ZDHHC20Q5W0Z9 365 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 Q6ZPB1 254 aaPredicted RBP10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 DAAM2Q86T65 1068 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 TRIM73Q86UV7 250 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 NT5DC3Q86UY8 548 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 FAM20CQ8IXL6 584 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 RNF10Q8N5U6 811 aaKnown RBP10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 FAF2Q96CS3 445 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 MESP1Q9BRJ9 268 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 MRPL47Q9HD33 250 aaKnown RBP10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 TXLNGQ9NUQ3 528 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 PLA2G3Q9NZ20 509 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 TNFRSF10DQ9UBN6 386 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 SH3BGRL2Q9UJC5 107 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 PACSIN2Q9UNF0 486 aaPredicted RBP10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 HYOU1Q9Y4L1 999 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 SCN2AQ99250 2005 aa10.91□□□□□ -0.66
SUPT16H-202ENST00000552829 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 DYTNA2CJ06 578 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 VSTM2BA6NLU5 285 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 HPP00738 406 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 CYP1A2P05177 515 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 POLBP06746 335 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 IGFBP2P18065 325 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 SPAM1P38567 509 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 ARG2P78540 354 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 SRSF11Q05519 484 aaKnown RBP10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 RBPJQ06330 500 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 KRT33BQ14525 404 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 ATP13A4Q4VNC1 1196 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 FAM151BQ6UXP7 276 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 MEX3BQ6ZN04 569 aaKnown RBP10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 AMIGO1Q86WK6 493 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 CPNE8Q86YQ8 564 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 RHOT2Q8IXI1 618 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 CFAP206Q8IYR0 622 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 OR52E1Q8NGJ3 308 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 NAT14Q8WUY8 206 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 N4BP2L2Q92802 583 aaPredicted RBP10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 TRIM11Q96F44 468 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 OR2A14Q96R47 310 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 FERD3LQ96RJ6 166 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 ZNF670Q9BS34 389 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 OR52A5Q9H2C5 316 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 TRABDQ9H4I3 376 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 DLL4Q9NR61 685 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 ENAMQ9NRM1 1142 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 TINAGQ9UJW2 476 aa10.9□□□□□ -0.66
SUPT16H-202ENST00000552829 GLYATL1P3A0A0U1RQE8 302 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 C17orf113A0A1B0GUU1 675 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 LOC285095A0A1B0GVY8 99 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 MYBL1P10243 752 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 DRD2P14416 443 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 UGT2B7P16662 529 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 CD151P48509 253 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 CASP6P55212 293 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 GUCA2AQ02747 115 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 ITGA9Q13797 1035 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 MESDQ14696 234 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 PCSK7Q16549 785 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 FAAH2Q6GMR7 532 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 DET1Q7L5Y6 550 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 CCNYQ8ND76 341 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 LRRN4CLQ8ND94 238 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 PHC3Q8NDX5 983 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 SPATA22Q8NHS9 363 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 HM13Q8TCT9 377 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 CAPZA3Q96KX2 299 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 FOXC2Q99958 501 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 GSX1Q9H4S2 264 aaPredicted RBP10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 XKR8Q9H6D3 395 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 MVB12BQ9H7P6 319 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 MEMO1Q9Y316 297 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 MRFAP1Q9Y605 127 aa10.89□□□□□ -0.67
SUPT16H-202ENST00000552829 VPS13CQ709C8 3753 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms