RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440	GC	P02774	474 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	NCF2	P19878	526 aa	Predicted RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	AZGP1	P25311	298 aa	Known RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	TKT	P29401	623 aa	Known RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	CDC25A	P30304	524 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	SLC6A6	P31641	620 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	HTR2B	P41595	481 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	GMPS	P49915	693 aa	Predicted RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	CNN1	P51911	297 aa	Known RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	TPM4	P67936	248 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	FOLH1	Q04609	750 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	TGM3	Q08188	693 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	TNK1	Q13470	666 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	TP53BP2	Q13625	1128 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	SHB	Q15464	509 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	AANAT	Q16613	207 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	NKAIN1	Q4KMZ8	207 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	MPPE1	Q53F39	396 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	LBH	Q53QV2	105 aa	Predicted RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	PLAC9	Q5JTB6	97 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	NCR3LG1	Q68D85	454 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	C18orf63	Q68DL7	685 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	DEGS2	Q6QHC5	323 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	MICALCL	Q6ZW33	695 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	TSPAN33	Q86UF1	283 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	SERINC5	Q86VE9	423 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	EFCAB13	Q8IY85	973 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	CSGALNACT2	Q8N6G5	542 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	AMER3	Q8N944	861 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	STKLD1	Q8NE28	680 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	BPIFC	Q8NFQ6	507 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	CLHC1	Q8NHS4	586 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	HDAC7	Q8WUI4	952 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	DAZAP1	Q96EP5	407 aa	Known RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	THOC3	Q96J01	351 aa	Known RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	RPRD1A	Q96P16	312 aa	Predicted RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	C1QTNF5	Q9BXJ0	243 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	FN3K	Q9H479	309 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	RIOX1	Q9H6W3	641 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	TDRD3	Q9H7E2	651 aa	Known RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	ACTR8	Q9H981	624 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	VAT1L	Q9HCJ6	419 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	ENTPD7	Q9NQZ7	604 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	ASNSD1	Q9NWL6	643 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	UPB1	Q9UBR1	384 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	GPR132	Q9UNW8	380 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	ENTPD4	Q9Y227	616 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	DTX4	Q9Y2E6	619 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	AATK	Q6ZMQ8	1374 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440		A0A1B0GUL7	405 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	MEI4	A8MW99	385 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	KBTBD13	C9JR72	458 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	KLK8	O60259	260 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	KCNJ13	O60928	360 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	SNN	O75324	88 aa	Predicted RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	CDKL5	O76039	1030 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	TOMM70	O94826	608 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	TJP3	O95049	919 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	HMBS	P08397	361 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	OR8G3P	P0DMU2	310 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	DDX5	P17844	614 aa	Known RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	ITGB8	P26012	769 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	GSTM2	P28161	218 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	MAGEB1	P43366	347 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	HAAO	P46952	286 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	ANXA11	P50995	505 aa	Known RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	HSF2	Q03933	536 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	REST	Q13127	1097 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	CHRNA6	Q15825	494 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	ST3GAL2	Q16842	350 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	TPD52L1	Q16890	204 aa	Predicted RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	KRT24	Q2M2I5	525 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	CERKL	Q49MI3	558 aa	Predicted RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	CDON	Q4KMG0	1287 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	RABL3	Q5HYI8	236 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	LRRC73	Q5JTD7	316 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	PIP5KL1	Q5T9C9	394 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	LRRC38	Q5VT99	294 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	ZNF627	Q7L945	461 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	PHLDB2	Q86SQ0	1253 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	GPR180	Q86V85	440 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	OFCC1	Q8IZS5	231 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	MINDY2	Q8NBR6	621 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	C17orf47	Q8NEP4	570 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	MDGA1	Q8NFP4	955 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	TAS1R2	Q8TE23	839 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	DQX1	Q8TE96	717 aa	Known RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	SLCO4A1	Q96BD0	722 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	LINGO1	Q96FE5	620 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	CDKN2AIPNL	Q96HQ2	116 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	MAGED4	Q96JG8	741 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	ZNF583	Q96ND8	569 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	MUS81	Q96NY9	551 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	SPAG8	Q99932	426 aa	Predicted RBP	4.07	□□□□□ -1.76
USP44-208	ENST00000552440	FICD	Q9BVA6	458 aa		4.07	□□□□□ -1.76
USP44-208	ENST00000552440	TRIM62	Q9BVG3	475 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 91 ms