RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 UGDHO60701 494 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 SLC16A8O95907 504 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 KRT6AP02538 564 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 KRT6BP04259 564 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 CAPN1P07384 714 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 THEGLP0DJG4 465 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 ITPKAP23677 461 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 NDUFS1P28331 727 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 PRDX3P30048 256 aaKnown RBP13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 KRT6CP48668 564 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 PXNP49023 591 aaPredicted RBP13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 RASSF2P50749 326 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 PNLIPRP1P54315 467 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 FOXK2Q01167 660 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 RPL6Q02878 288 aaKnown RBP13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 PCDH1Q08174 1060 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 KRT33BQ14525 404 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 CCSMST1Q4G0I0 132 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 GGTA1PQ4G0N0 100 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 LIPJQ5W064 366 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 LETMD1Q6P1Q0 360 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 ABRAXAS1Q6UWZ7 409 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 RNF165Q6ZSG1 346 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 IQCHQ86VS3 1027 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 HID1Q8IV36 788 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 DDIASQ8IXT1 998 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 SYTL1Q8IYJ3 562 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 RGL4Q8IZJ4 473 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 FAM160A2Q8N612 972 aaPredicted RBP13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 FRMD1Q8N878 549 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 MFSD2AQ8NA29 543 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 OR13H1Q8NG92 308 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 ZNF480Q8WV37 535 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 EDAQ92838 391 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 TSACCQ96A04 125 aaPredicted RBP13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 C12orf66Q96MD2 445 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 KCNA7Q96RP8 456 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 INSM2Q96T92 566 aaPredicted RBP13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 MIPEPQ99797 713 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 CD320Q9NPF0 282 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 ZNF225Q9UK10 706 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 DYRK1BQ9Y463 629 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 PLEKHM1Q9Y4G2 1056 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 TIMM22Q9Y584 194 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 KCNE2Q9Y6J6 123 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 COLEC10Q9Y6Z7 277 aa13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 ZFC3H1O60293 1989 aaKnown RBP13.3□□□□□ -0.28
CALCOCO1-214ENST00000549613 SPTY2D1-AS1A0A0U1RR47 76 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 MEI4A8MW99 385 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 E9PBE3 544 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 PIP5K1BO14986 540 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 SLC22A2O15244 555 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 KLHL41O60662 606 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 LBPP18428 481 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 RPL10P27635 214 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 FOXA1P55317 472 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 CTBSQ01459 385 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 IRF8Q02556 426 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 ZNF33BQ06732 778 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 ILF3Q12906 894 aaKnown RBP eCLIP13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 ZXDCQ2QGD7 858 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 ALG11Q2TAA5 492 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 TPRG1LQ5T0D9 272 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 CPSF7Q8N684 471 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 L3MBTL4Q8NA19 623 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 OR5AR1Q8NGP9 310 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 PYCR2Q96C36 320 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 TUBGCP3Q96CW5 907 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 MED8Q96G25 268 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 PDXPQ96GD0 296 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 PPP1R36Q96LQ0 422 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 CDK15Q96Q40 435 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 ORAI3Q9BRQ5 295 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 CCDC106Q9BWC9 280 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 SGPP1Q9BX95 441 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 RAB11FIP5Q9BXF6 653 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 GSDMCQ9BYG8 508 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 PCBD2Q9H0N5 130 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 GPR27Q9NS67 375 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 INTS7Q9NVH2 962 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 SPATA6Q9NWH7 488 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 PCOLCE2Q9UKZ9 415 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 SNX6Q9UNH7 406 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 TDRKHQ9Y2W6 561 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 CAPN7Q9Y6W3 813 aa13.29□□□□□ -0.28
CALCOCO1-214ENST00000549613 A0A1B0GTL3 188 aa13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 E7ENX8 843 aa13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 SLC28A1O00337 649 aa13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 UBDO15205 165 aa13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 ULK1O75385 1050 aa13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 JUNP05412 331 aaKnown RBP13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 LINC00032P0C843 101 aa13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 EZRP15311 586 aaKnown RBP13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 GNAZP19086 355 aa13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 AOC1P19801 751 aa13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 CD38P28907 300 aa13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 HNF4AP41235 474 aa13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 ACTR1BP42025 376 aa13.28□□□□□ -0.28
CALCOCO1-214ENST00000549613 CASP2P42575 452 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms