RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 CDKN1CP49918 316 aaPredicted RBP11.76□□□□□ -0.53
DDX54-206ENST00000549271 PTCHD3Q3KNS1 767 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 GPR33Q49SQ1 333 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 ZNF385CQ66K41 422 aaPredicted RBP11.76□□□□□ -0.53
DDX54-206ENST00000549271 FCRL6Q6DN72 434 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 SNX20Q7Z614 316 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 CFAP206Q8IYR0 622 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 OR4E2Q8NGC2 313 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 C14orf79Q96F83 325 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 DCUN1D1Q96GG9 259 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 DNAJC1Q96KC8 554 aaKnown RBP11.76□□□□□ -0.53
DDX54-206ENST00000549271 PPM1MQ96MI6 270 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 COPS8Q99627 209 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 DPH2Q9BQC3 489 aaPredicted RBP11.76□□□□□ -0.53
DDX54-206ENST00000549271 OR52A5Q9H2C5 316 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 NLE1Q9NVX2 485 aaPredicted RBP11.76□□□□□ -0.53
DDX54-206ENST00000549271 SOHLH2Q9NX45 425 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 ZNF148Q9UQR1 794 aa11.76□□□□□ -0.53
DDX54-206ENST00000549271 TRBV5-4A0A0C4DH59 114 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 MROH6A6NGR9 719 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 CFAP99D6REC4 459 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 H7C0S8 307 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 PEX12O00623 359 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 PCDH17O14917 1159 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 SUN1O94901 812 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 IFNB1P01574 187 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 POLBP06746 335 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 GSTM1P09488 218 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 PRSS56P0CW18 603 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 ATP1B2P14415 290 aaPredicted RBP11.75□□□□□ -0.53
DDX54-206ENST00000549271 ITGALP20701 1170 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 PRDX3P30048 256 aaKnown RBP11.75□□□□□ -0.53
DDX54-206ENST00000549271 FDFT1P37268 417 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 GRIA1P42261 906 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 TDGF1P3P51864 188 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 GSTM4Q03013 218 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 CDC16Q13042 620 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 RPA4Q13156 261 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 KRT33BQ14525 404 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 GSE1Q14687 1217 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 POU6F1Q14863 301 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 ZNF169Q14929 603 aaPredicted RBP11.75□□□□□ -0.53
DDX54-206ENST00000549271 CCNG2Q16589 344 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 ZNF324BQ6AW86 544 aaPredicted RBP11.75□□□□□ -0.53
DDX54-206ENST00000549271 DRICH1Q6PGQ1 229 aaPredicted RBP11.75□□□□□ -0.53
DDX54-206ENST00000549271 FBXO38Q6PIJ6 1188 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 RPTNQ6XPR3 784 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 LILRA3Q8N6C8 439 aaPredicted RBP11.75□□□□□ -0.53
DDX54-206ENST00000549271 TRIM58Q8NG06 486 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 OR52K1Q8NGK4 314 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 OR1L3Q8NH93 324 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 LCN9Q8WX39 176 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 LRRC45Q96CN5 670 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 CDKN2AIPNLQ96HQ2 116 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 ALS2CR12Q96Q35 445 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 TMUB1Q9BVT8 246 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 CHRNA10Q9GZZ6 450 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 SRMSQ9H3Y6 488 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 MVB12BQ9H7P6 319 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 ACTR5Q9H9F9 607 aaPredicted RBP11.75□□□□□ -0.53
DDX54-206ENST00000549271 GRPEL1Q9HAV7 217 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 P4HTMQ9NXG6 502 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 SUCOQ9UBS9 1254 aaKnown RBP11.75□□□□□ -0.53
DDX54-206ENST00000549271 CRLS1Q9UJA2 301 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 SERTAD3Q9UJW9 196 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 DRG1Q9Y295 367 aaKnown RBP11.75□□□□□ -0.53
DDX54-206ENST00000549271 ACANP16112 2415 aa11.75□□□□□ -0.53
DDX54-206ENST00000549271 ERI2A8K979 691 aaKnown RBP11.74□□□□□ -0.53
DDX54-206ENST00000549271 C9J4A7 227 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 BTN3A3O00478 584 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 BTN3A1O00481 513 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 MAP3K7O43318 606 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 NADKO95544 446 aaPredicted RBP11.74□□□□□ -0.53
DDX54-206ENST00000549271 FGGP02679 453 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 HBQ1P09105 142 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 ZSCAN5DPP0CG00 497 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 ST6GAL1P15907 406 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 MC4RP32245 332 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 RPL22P35268 128 aaKnown RBP11.74□□□□□ -0.53
DDX54-206ENST00000549271 PREPP48147 710 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 ARCN1P48444 511 aaKnown RBP11.74□□□□□ -0.53
DDX54-206ENST00000549271 KCNK10P57789 538 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 RPUSD3Q6P087 351 aaKnown RBP11.74□□□□□ -0.53
DDX54-206ENST00000549271 FAM180AQ6UWF9 173 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 LINC00523Q86TU6 105 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 PIANPQ8IYJ0 282 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 BCORP1Q8N888 145 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 DNAJB14Q8TBM8 379 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 STYXQ8WUJ0 223 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 COG4Q9H9E3 785 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 VPS37BQ9H9H4 285 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 ATP13A2Q9NQ11 1180 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 OLAHQ9NV23 265 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 ZDHHC3Q9NYG2 299 aa11.74□□□□□ -0.53
DDX54-206ENST00000549271 GSAPA4D1B5 854 aa11.73□□□□□ -0.53
DDX54-206ENST00000549271 C2orf74A8MZ97 194 aa11.73□□□□□ -0.53
DDX54-206ENST00000549271 TMEM150CB9EJG8 249 aa11.73□□□□□ -0.53
DDX54-206ENST00000549271 C19orf84I3L1E1 186 aa11.73□□□□□ -0.53
DDX54-206ENST00000549271 IFRD1O00458 451 aaPredicted RBP11.73□□□□□ -0.53
DDX54-206ENST00000549271 FAM155BO75949 473 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms