RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 COPG1Q9Y678 874 aaKnown RBP12.37□□□□□ -0.43
PTCH1-218ENST00000548945 PRSS21Q9Y6M0 314 aa12.37□□□□□ -0.43
PTCH1-218ENST00000548945 TEP1Q99973 2627 aaKnown RBP12.37□□□□□ -0.43
PTCH1-218ENST00000548945 RCCD1A6NED2 376 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 ISM1B1AKI9 464 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 FKBP9O95302 570 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 IPO7O95373 1038 aaKnown RBP12.36□□□□□ -0.43
PTCH1-218ENST00000548945 METTL18O95568 372 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 CLDN1O95832 211 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 RPN2P04844 631 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 PEBP1P30086 187 aaKnown RBP12.36□□□□□ -0.43
PTCH1-218ENST00000548945 PKLRP30613 574 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 ELOAQ14241 798 aaKnown RBP12.36□□□□□ -0.43
PTCH1-218ENST00000548945 BRD3Q15059 726 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 OVCH1Q7RTY7 1134 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 SLC22A15Q8IZD6 547 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 PPP4R1Q8TF05 950 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 UBE2Q2Q8WVN8 375 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 INPP5DQ92835 1189 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 PANX2Q96RD6 677 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 SLC26A1Q9H2B4 701 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 MRM3Q9HC36 420 aaKnown RBP12.36□□□□□ -0.43
PTCH1-218ENST00000548945 AGPAT4Q9NRZ5 378 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 SLC22A11Q9NSA0 550 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 INTS7Q9NVH2 962 aaKnown RBP12.36□□□□□ -0.43
PTCH1-218ENST00000548945 IRAK4Q9NWZ3 460 aa12.36□□□□□ -0.43
PTCH1-218ENST00000548945 EPN1Q9Y6I3 576 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-218ENST00000548945 HEATR5BQ9P2D3 2071 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 A0A1B0GX78 115 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 HEATR9A2RTY3 570 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 CCDC162PA2VCL2 907 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 S1PR4O95977 384 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 GAS8O95995 478 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 PTMAP06454 111 aaKnown RBP12.35□□□□□ -0.43
PTCH1-218ENST00000548945 CTSBP07858 339 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 MAGP20916 626 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 PPARGP37231 505 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-218ENST00000548945 DCTP40126 519 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 NAP1L1P55209 391 aaKnown RBP12.35□□□□□ -0.43
PTCH1-218ENST00000548945 CDH17Q12864 832 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 KLF1Q13351 362 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-218ENST00000548945 SLC9A5Q14940 896 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 TCTE1Q5JU00 501 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 PRAMEF13Q5VWM6 474 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 AADACL2Q6P093 401 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 AFTPHQ6ULP2 937 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 IGFL2Q6UWQ7 119 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 MICALCLQ6ZW33 695 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 CUZD1Q86UP6 607 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 MCATQ8IVS2 390 aaKnown RBP12.35□□□□□ -0.43
PTCH1-218ENST00000548945 UBL4BQ8N7F7 174 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 ST6GALNAC3Q8NDV1 305 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 OR13J1Q8NGT2 312 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 SLC35B2Q8TB61 432 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 ASZ1Q8WWH4 475 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 PEX13Q92968 403 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 VPS50Q96JG6 964 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 RANBP9Q96S59 729 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 WDR77Q9BQA1 342 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-218ENST00000548945 MENTQ9BUN1 341 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 TSSK1BQ9BXA7 367 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 IL1RAPL1Q9NZN1 696 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 NXT1Q9UKK6 140 aaKnown RBP12.35□□□□□ -0.43
PTCH1-218ENST00000548945 DUSP10Q9Y6W6 482 aa12.35□□□□□ -0.43
PTCH1-218ENST00000548945 TACC2O95359 2948 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 OR51F1A6NGY5 319 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 ENO4A6NNW6 628 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 GOLGA6L6A8MZA4 724 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 MIF4GDA9UHW6 222 aaKnown RBP12.34□□□□□ -0.43
PTCH1-218ENST00000548945 DSCR3O14972 297 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 GPC4O75487 556 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 CD9P21926 228 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 ALAS2P22557 587 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 ITGA3P26006 1051 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 ACVR1Q04771 509 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 ZC3H12BQ5HYM0 836 aaKnown RBP12.34□□□□□ -0.43
PTCH1-218ENST00000548945 AGAP7PQ5VUJ5 663 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 B3GNTL1Q67FW5 361 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-218ENST00000548945 UNC5DQ6UXZ4 953 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 TTLL10Q6ZVT0 673 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 NLRP9Q7RTR0 991 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 DCUN1D3Q8IWE4 304 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 LINC01555Q8NAE3 123 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 HDAC10Q969S8 669 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 ZNF285Q96NJ3 590 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 AGAP4Q96P64 663 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 TMEM121Q9BTD3 319 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 CARD6Q9BX69 1037 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 SLC6A20Q9NP91 592 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 PIH1D1Q9NWS0 290 aaKnown RBP12.34□□□□□ -0.43
PTCH1-218ENST00000548945 FBXL4Q9UKA2 621 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 AMFRQ9UKV5 643 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 PLAGL1Q9UM63 463 aa12.34□□□□□ -0.43
PTCH1-218ENST00000548945 CSMD1Q96PZ7 3565 aa12.33□□□□□ -0.44
PTCH1-218ENST00000548945 GRID2IPA4D2P6 1211 aa12.33□□□□□ -0.44
PTCH1-218ENST00000548945 FITM1A5D6W6 292 aa12.33□□□□□ -0.44
PTCH1-218ENST00000548945 SOWAHDA6NJG2 315 aa12.33□□□□□ -0.44
PTCH1-218ENST00000548945 TARM1B6A8C7 271 aa12.33□□□□□ -0.44
PTCH1-218ENST00000548945 SOCS6O14544 535 aa12.33□□□□□ -0.44
PTCH1-218ENST00000548945 OR1I1O60431 355 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms