RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 MAP2K4P45985 399 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 OR1G1P47890 313 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 PIK3CGP48736 1102 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 MASP1P48740 699 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 DAPP51397 102 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 VBP1P61758 197 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 RPS14P62263 151 aaKnown RBP9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 PHC1P78364 1004 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 CD300CQ08708 224 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 GBX1Q14549 363 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 BCL2A1Q16548 175 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 PLEKHG6Q3KR16 790 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 TTLL9Q3SXZ7 439 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 CARD16Q5EG05 197 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 C9orf131Q5VYM1 1079 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 OR2T5Q6IEZ7 315 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 NCEH1Q6PIU2 408 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 CHST9Q7L1S5 443 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 GALNT5Q7Z7M9 940 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 TSPYL5Q86VY4 417 aaPredicted RBP9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 LACC1Q8IV20 430 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 C10orf111Q8N326 155 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 PGBD3Q8N328 593 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 OR2T29Q8NH02 315 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 IPCEF1Q8WWN9 437 aaPredicted RBP9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 SLIRPQ9GZT3 109 aaKnown RBP9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 RIBC2Q9H4K1 309 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 RDH14Q9HBH5 336 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 SPC25Q9HBM1 224 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 ACOT13Q9NPJ3 140 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 SLC6A13Q9NSD5 602 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 VNN3Q9NY84 501 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 ANKMY1Q9P2S6 941 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 NDRG4Q9ULP0 352 aaKnown RBP9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 GMPPBQ9Y5P6 360 aa9.65□□□□□ -0.87
SMARCD1-205ENST00000548573 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 LOC730098B7Z3J9 87 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 ARVCFO00192 962 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 CBX4O00257 560 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 FZD6O60353 706 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 MAN1A2O60476 641 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 EIF2S1P05198 315 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 PRPS2P11908 318 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 EPB42P16452 691 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 PSMB9P28065 219 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 PTPN6P29350 595 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 CD40LGP29965 261 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 DNAJA1P31689 397 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 PPP5CP53041 499 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 FCGRTP55899 365 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 RPS24P62847 133 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 FKBP1BP68106 108 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 CDC20Q12834 499 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 ZNF177Q13360 481 aaPredicted RBP9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 SIM2Q14190 667 aaPredicted RBP9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 INAVAQ3KP66 663 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 LAIR1Q6GTX8 287 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 MSANTD1Q6ZTZ1 278 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 SERPINA11Q86U17 422 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 RBFAQ8N0V3 343 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 ZNF540Q8NDQ6 660 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 RHOXF1Q8NHV9 184 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 SOCS4Q8WXH5 440 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 EFHD2Q96C19 240 aaPredicted RBP9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 ULK4Q96C45 1275 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 LGALS12Q96DT0 336 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 PARVBQ9HBI1 364 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 KIAA1522Q9P206 1035 aaPredicted RBP9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 TSR3Q9UJK0 312 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 DNMT3LQ9UJW3 386 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 OSGIN1Q9UJX0 560 aa9.64□□□□□ -0.87
SMARCD1-205ENST00000548573 ISPDA4D126 451 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 MTMR11A4FU01 709 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 GPR39O43194 453 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 SEC24AO95486 1093 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 KRT6AP02538 564 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 MT-ND2P03891 347 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 KRT6BP04259 564 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 EFNA1P20827 205 aaPredicted RBP9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 FPR1P21462 350 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 ATP5C1P36542 298 aaKnown RBP9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 GDF5P43026 501 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 KRT6CP48668 564 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 NCS1P62166 190 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 LSM3P62310 102 aaKnown RBP9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 CSNK2BP67870 215 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 ARF5P84085 180 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 MAD2L1BPQ15013 274 aaPredicted RBP9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 PTPRRQ15256 657 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 PHKG1Q16816 387 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 FAM26DQ5JW98 314 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 CLLU1OSQ5K130 101 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 TTC23LQ6PF05 361 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 CEP68Q76N32 757 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 SERPINA9Q86WD7 417 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 KIAA1958Q8N8K9 716 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 TTC29Q8NA56 475 aaPredicted RBP9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 TRPV1Q8NER1 839 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 HPS1Q92902 700 aa9.63□□□□□ -0.87
SMARCD1-205ENST00000548573 TESCQ96BS2 214 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms