RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 RPRD1BQ9NQG5 326 aaKnown RBP6.43□□□□□ -1.38
CASC18-202ENST00000548557 TBC1D29Q9UFV1 150 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 PPT2Q9UMR5 302 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 SATB2Q9UPW6 733 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 RUVBL2Q9Y230 463 aaKnown RBP6.43□□□□□ -1.38
CASC18-202ENST00000548557 CCDC78A2IDD5 438 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 CAPN8A6NHC0 703 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 LRRC14BA6NHZ5 514 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 UPK3BL1B0FP48 263 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 UPK3BL2E5RIL1 263 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 KPNA3O00505 521 aaPredicted RBP6.43□□□□□ -1.38
CASC18-202ENST00000548557 SLC22A2O15244 555 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 SMIM24O75264 130 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 SLC22A3O75751 556 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 TRIM16O95361 564 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 OPN1MWP04001 364 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 OPN1MW2P0DN77 364 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 OPN1MW3P0DN78 364 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 THRAP10827 490 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 IL10P22301 178 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 SERPINB5P36952 375 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 DGKEP52429 567 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 PGGT1BP53609 377 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 INHBCP55103 352 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 PRKAA1Q13131 559 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 TAF1AQ15573 450 aaPredicted RBP6.43□□□□□ -1.38
CASC18-202ENST00000548557 CST6Q15828 149 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 Q3ZCU0 254 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 ARL13AQ5H913 290 aaPredicted RBP6.43□□□□□ -1.38
CASC18-202ENST00000548557 LPCAT4Q643R3 524 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 SEL1L3Q68CR1 1132 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 RPUSD3Q6P087 351 aaKnown RBP6.43□□□□□ -1.38
CASC18-202ENST00000548557 ACAD11Q709F0 780 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 NLRP8Q86W28 1048 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 KRT73Q86Y46 540 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 MMAAQ8IVH4 418 aaKnown RBP6.43□□□□□ -1.38
CASC18-202ENST00000548557 FSTL5Q8N475 847 aaPredicted RBP6.43□□□□□ -1.38
CASC18-202ENST00000548557 RP9Q8TA86 221 aaKnown RBP6.43□□□□□ -1.38
CASC18-202ENST00000548557 TSNARE1Q96NA8 513 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 HDAC8Q9BY41 377 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 KLHL4Q9C0H6 718 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 ZNF385DQ9H6B1 395 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 TBC1D17Q9HA65 648 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 ZDHHC4Q9NPG8 344 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 ACSS2Q9NR19 701 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.43□□□□□ -1.38
CASC18-202ENST00000548557 ZDHHC2Q9UIJ5 367 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 SARDHQ9UL12 918 aa6.43□□□□□ -1.38
CASC18-202ENST00000548557 PRPF19Q9UMS4 504 aaKnown RBP6.43□□□□□ -1.38
CASC18-202ENST00000548557 MROH6A6NGR9 719 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 SLCO1B7G3V0H7 640 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 NEMP1O14524 444 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 PEX1O43933 1283 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 ZCCHC18P0CG32 403 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 PIM1P11309 404 aaPredicted RBP6.42□□□□□ -1.38
CASC18-202ENST00000548557 UQCRBP14927 111 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 ZNF30P17039 623 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 DDX5P17844 614 aaKnown RBP6.42□□□□□ -1.38
CASC18-202ENST00000548557 SAT1P21673 171 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 PEX2P28328 305 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 EPHA3P29320 983 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 ADSLP30566 484 aaPredicted RBP6.42□□□□□ -1.38
CASC18-202ENST00000548557 HMGCLP35914 325 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 GLRBP48167 497 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 ARCN1P48444 511 aaKnown RBP6.42□□□□□ -1.38
CASC18-202ENST00000548557 NAGLUP54802 743 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 OLR1P78380 273 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 ELP6Q0PNE2 266 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 C19orf57Q0VDD7 668 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 SLC14A1Q13336 389 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 DOC2AQ14183 400 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 POU6F1Q14863 301 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 LRRC8EQ6NSJ5 796 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 KIAA1211LQ6NV74 962 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 FBXL19Q6PCT2 694 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 C16orf89Q6UX73 402 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 ERN2Q76MJ5 926 aaKnown RBP6.42□□□□□ -1.38
CASC18-202ENST00000548557 RAB11FIP2Q7L804 512 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 NLRC3Q7RTR2 1065 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 ZSWIM9Q86XI8 627 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 P3H2Q8IVL5 708 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 SLC22A9Q8IVM8 553 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 DENND6AQ8IWF6 608 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 HIPK4Q8NE63 616 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 OR56B2PQ8NGI1 322 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 BLOC1S5Q8TDH9 187 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 ASB12Q8WXK4 309 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 DTNBP1Q96EV8 351 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 GPR78Q96P69 363 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 CCDC28BQ9BUN5 200 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 NUF2Q9BZD4 464 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 CHRDQ9H2X0 955 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 SYNDIG1Q9H7V2 258 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 SCPEP1Q9HB40 452 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 XPR1Q9UBH6 696 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 ACOT9Q9Y305 439 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 SIT1Q9Y3P8 196 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 TCAF1Q9Y4C2 921 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 FAM95CA0A1B0GW59 222 aa6.42□□□□□ -1.38
CASC18-202ENST00000548557 A0A1W2PPH5 198 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms