RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 E2F6O75461 281 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 PCCBP05166 539 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 GRIA2P42262 883 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 HTRA4P83105 476 aaPredicted RBP12.39□□□□□ -0.43
SCAF11-209ENST00000547018 ZNF805Q5CZA5 627 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 C11orf96Q7Z7L8 435 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 SYT12Q8IV01 421 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 TRIML2Q8N7C3 387 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 PDPRQ8NCN5 879 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 SUSD6Q92537 303 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 SNX19Q92543 992 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 BIRC7Q96CA5 298 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 FBXL20Q96IG2 436 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 SLC6A17Q9H1V8 727 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 C1orf109Q9NX04 203 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 COL4A4P53420 1690 aaPredicted RBP12.38□□□□□ -0.43
SCAF11-209ENST00000547018 H3BM21 787 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 WNT9AO14904 365 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 KCNH1O95259 989 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 SLC7A1P30825 629 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 NFE2L1Q14494 772 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 TMEM31Q5JXX7 168 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 TANGO2Q6ICL3 276 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 BRAT1Q6PJG6 821 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 FAM20CQ8IXL6 584 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 FAM217AQ8IXS0 508 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 DTWD1Q8N5C7 304 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 CHFRQ96EP1 664 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 ZNF641Q96N77 438 aaPredicted RBP12.38□□□□□ -0.43
SCAF11-209ENST00000547018 ANKRD27Q96NW4 1050 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 CHID1Q9BWS9 393 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 OSBPL6Q9BZF3 934 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 RETREG1Q9H6L5 497 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 EXD2Q9NVH0 621 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 GPRC5BQ9NZH0 403 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 TRBV23OR9-2A0A075B6M9 112 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 KLK8O60259 260 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 NOBOXO60393 691 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 CLPTM1O96005 669 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 TGFB1P01137 390 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 TPD52P55327 224 aaPredicted RBP12.38□□□□□ -0.43
SCAF11-209ENST00000547018 EMX2Q04743 252 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 GTF2H3Q13889 308 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCAF11-209ENST00000547018 PYCR3Q53H96 274 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 CATSPEREQ5SY80 951 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 AGTRAPQ6RW13 159 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 ENPP6Q6UWR7 440 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.38□□□□□ -0.43
SCAF11-209ENST00000547018 ADCK2Q7Z695 626 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 ZFAND4Q86XD8 727 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 OR2T12Q8NG77 320 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 BPIFB1Q8TDL5 484 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 GLYATL1Q969I3 302 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 ZNF707Q96C28 371 aaPredicted RBP12.38□□□□□ -0.43
SCAF11-209ENST00000547018 ECHDC3Q96DC8 303 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 RPP25Q9BUL9 199 aaKnown RBP12.38□□□□□ -0.43
SCAF11-209ENST00000547018 SGK2Q9HBY8 427 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 DNAJC11Q9NVH1 559 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 ANAPC2Q9UJX6 822 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 TRBV5-4A0A0C4DH59 114 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 BBIP1A8MTZ0 92 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 MYO1GB0I1T2 1018 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 EEF1B2P24534 225 aaKnown RBP12.38□□□□□ -0.43
SCAF11-209ENST00000547018 RD3Q7Z3Z2 195 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 SZRD1Q7Z422 152 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 PLD3Q8IV08 490 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 C10orf111Q8N326 155 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 ZNF740Q8NDX6 193 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 VN1R2Q8NFZ6 395 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 FRS2Q8WU20 508 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 ASB11Q8WXH4 323 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 VOPP1Q96AW1 172 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 SH3KBP1Q96B97 665 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 MRGPRX3Q96LB0 322 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 DPH2Q9BQC3 489 aaPredicted RBP12.38□□□□□ -0.43
SCAF11-209ENST00000547018 ADGRE2Q9UHX3 823 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 ASF1AQ9Y294 204 aa12.38□□□□□ -0.43
SCAF11-209ENST00000547018 TCF20Q9UGU0 1960 aaKnown RBP12.37□□□□□ -0.43
SCAF11-209ENST00000547018 PAK4O96013 591 aaPredicted RBP12.37□□□□□ -0.43
SCAF11-209ENST00000547018 ADH1CP00326 375 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 EPORP19235 508 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 RPS3P23396 243 aaKnown RBP eCLIP12.37□□□□□ -0.43
SCAF11-209ENST00000547018 CDKN2CP42773 168 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 RPS14P62263 151 aaKnown RBP12.37□□□□□ -0.43
SCAF11-209ENST00000547018 BIRC2Q13490 618 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 SPIDRQ14159 915 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.37□□□□□ -0.43
SCAF11-209ENST00000547018 ADGRG6Q86SQ4 1221 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 THOC6Q86W42 341 aaKnown RBP12.37□□□□□ -0.43
SCAF11-209ENST00000547018 HID1Q8IV36 788 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 SLC44A2Q8IWA5 706 aaPredicted RBP12.37□□□□□ -0.43
SCAF11-209ENST00000547018 CLECL1Q8IZS7 167 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 CELF5Q8N6W0 485 aaKnown RBP12.37□□□□□ -0.43
SCAF11-209ENST00000547018 PLA2G15Q8NCC3 412 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 ADCY4Q8NFM4 1077 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 FAM120BQ96EK7 910 aaKnown RBP12.37□□□□□ -0.43
SCAF11-209ENST00000547018 TRIM15Q9C019 465 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 OR51B5Q9H339 312 aa12.37□□□□□ -0.43
SCAF11-209ENST00000547018 DDX18Q9NVP1 670 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms