RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 CXorf49A8MYA2 514 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-212ENST00000546744 H3BMQ9 156 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 UPK1BO75841 260 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 CD2P06729 351 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 CD48P09326 243 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 EPHB3P54753 998 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 PPP2R2BQ00005 443 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 CEACAM7Q14002 265 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 GK3PQ14409 553 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 TSTQ16762 297 aaKnown RBP12.54□□□□□ -0.4
PTCH1-212ENST00000546744 ESRP1Q6NXG1 681 aaKnown RBP12.54□□□□□ -0.4
PTCH1-212ENST00000546744 RTL4Q6ZR62 310 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 DSG4Q86SJ6 1040 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 PPP1R14AQ96A00 147 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 BTN2A3PQ96KV6 586 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 COG8Q96MW5 612 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 NIFKQ9BYG3 293 aaKnown RBP12.54□□□□□ -0.4
PTCH1-212ENST00000546744 SEZ6LQ9BYH1 1024 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 CST11Q9H112 138 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 FLRT1Q9NZU1 646 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 FAM25EA8MYX2 175 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 hCG_2039718K7EN88 272 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 SCAMP3O14828 347 aaKnown RBP12.54□□□□□ -0.4
PTCH1-212ENST00000546744 UBA1P22314 1058 aaKnown RBP12.54□□□□□ -0.4
PTCH1-212ENST00000546744 AGTR1P30556 359 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 CBX5P45973 191 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 BMXP51813 675 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 SMSP52788 366 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 S100A12P80511 92 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 NRG1Q02297 640 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-212ENST00000546744 ANKDD1AQ495B1 522 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 DOK6Q6PKX4 331 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 TMC8Q8IU68 726 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 FAM46DQ8NEK8 389 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 PEX13Q92968 403 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 TMEM80Q96HE8 168 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 ASPNQ9BXN1 380 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 EBF1Q9UH73 591 aa12.54□□□□□ -0.4
PTCH1-212ENST00000546744 GRID2O43424 1007 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 LRG1P02750 347 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 ANXA4P09525 319 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-212ENST00000546744 CETPP11597 493 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 IL7RP16871 459 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 DNASE1P24855 282 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 HTR2BP41595 481 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 RFX3P48380 749 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 YAF2Q8IY57 180 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 CFAP206Q8IYR0 622 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 SNX33Q8WV41 574 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 SCRN2Q96FV2 425 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 SMURF1Q9HCE7 757 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 PRKAG2Q9UGJ0 569 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 CDC14AQ9UNH5 594 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 CEPT1Q9Y6K0 416 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 KMOO15229 486 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 CLDN11O75508 207 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 LRATO95237 230 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 SLURP2P0DP57 97 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 BDNFP23560 247 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 IDNKQ5T6J7 187 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 CXorf57Q6NSI4 855 aaKnown RBP12.53□□□□□ -0.4
PTCH1-212ENST00000546744 SERPINA13PQ6UXR4 307 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 VWA5B2Q8N398 1253 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 ZBTB2Q8N680 514 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 SGCDQ92629 289 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 SMOXQ9NWM0 555 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 SRRDQ9UH36 339 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 FZD10Q9ULW2 581 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 LY75O60449 1722 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 MYH7BA7E2Y1 1941 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 CD247P20963 164 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 SLC1A2P43004 574 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 XKP51811 444 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 C10orf62Q5T681 223 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-212ENST00000546744 CCSAPQ6IQ19 270 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-212ENST00000546744 TATDN1Q6P1N9 297 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 THAP6Q8TBB0 222 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 POF1BQ8WVV4 589 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 ASB12Q8WXK4 309 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 KAT2AQ92830 837 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 MED30Q96HR3 178 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 FUZQ9BT04 418 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 TRIM36Q9NQ86 728 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 BAZ2AQ9UIF9 1905 aaKnown RBP12.53□□□□□ -0.4
PTCH1-212ENST00000546744 ZNF831Q5JPB2 1677 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 PPEF2O14830 753 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 PBLDP30039 288 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-212ENST00000546744 TNFSF9P41273 254 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 SPRED3Q2MJR0 410 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 ALG11Q2TAA5 492 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 FAM76BQ5HYJ3 339 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 PPP2R2DQ66LE6 453 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 TSPYL5Q86VY4 417 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-212ENST00000546744 SPERTQ8NA61 448 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 ZNF548Q8NEK5 533 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-212ENST00000546744 STOML3Q8TAV4 291 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 TMEM169Q96HH4 297 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 MYRFLQ96LU7 910 aa12.53□□□□□ -0.4
PTCH1-212ENST00000546744 BRD9Q9H8M2 597 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms