RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 FAM136AQ96C01 138 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 C16orf45Q96MC5 204 aaPredicted RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 UBL7Q96S82 380 aaPredicted RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 SLC30A3Q99726 388 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 EFHD1Q9BUP0 239 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 PHACTR1Q9C0D0 580 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 SPATA7Q9P0W8 599 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 SLC39A10Q9ULF5 831 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 PCDHGA4Q9Y5G9 962 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 A0A0J9YY10 115 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 MYO1CO00159 1063 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 EIF3HO15372 352 aaKnown RBP eCLIP11.46□□□□□ -0.57
YBX3-217ENST00000546164 MAP3K7O43318 606 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 PRICKLE3O43900 615 aaPredicted RBP11.46□□□□□ -0.57
YBX3-217ENST00000546164 KIAA0754O94854 1291 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 F7P08709 466 aaPredicted RBP11.46□□□□□ -0.57
YBX3-217ENST00000546164 MPC1LP0DKB6 136 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 ERGP11308 486 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 LIFP15018 202 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 PVRP15151 417 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 SKIV2L2P42285 1042 aaKnown RBP11.46□□□□□ -0.57
YBX3-217ENST00000546164 BDKRB1P46663 353 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 MRPS25P82663 173 aaKnown RBP11.46□□□□□ -0.57
YBX3-217ENST00000546164 PDIA2Q13087 525 aaKnown RBP11.46□□□□□ -0.57
YBX3-217ENST00000546164 GPR19Q15760 415 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 WHAMMP3Q1A5X7 153 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 KLHL38Q2WGJ6 581 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 PWWP2BQ6NUJ5 590 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 TRMT10BQ6PF06 316 aaKnown RBP11.46□□□□□ -0.57
YBX3-217ENST00000546164 TRIM73Q86UV7 250 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 RAB42Q8N4Z0 105 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 FBXO36Q8NEA4 188 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 DENND1AQ8TEH3 1009 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 KIAA1143Q96AT1 154 aaPredicted RBP11.46□□□□□ -0.57
YBX3-217ENST00000546164 WBP1Q96G27 269 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 CFAP36Q96G28 342 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 TCTN2Q96GX1 697 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 ELMO2Q96JJ3 720 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 SLC45A3Q96JT2 553 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 LRFN5Q96NI6 719 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 IL17FQ96PD4 163 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 GPR21Q99679 349 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 RAB17Q9H0T7 212 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 FANCEQ9HB96 536 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 FAM114A2Q9NRY5 505 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 MOCS1Q9NZB8 636 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 GRHL1Q9NZI5 618 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 LNPEPQ9UIQ6 1025 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 RALYQ9UKM9 306 aaKnown RBP11.46□□□□□ -0.57
YBX3-217ENST00000546164 CORO1CQ9ULV4 474 aaPredicted RBP11.46□□□□□ -0.57
YBX3-217ENST00000546164 RUVBL2Q9Y230 463 aaKnown RBP11.46□□□□□ -0.57
YBX3-217ENST00000546164 PCDHB3Q9Y5E6 796 aa11.46□□□□□ -0.57
YBX3-217ENST00000546164 SEC16AO15027 2179 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 PIEZO2Q9H5I5 2752 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 LOC101059948A0A1B0GTJ6 334 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 ARHGEF33A8MVX0 844 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 ISM1B1AKI9 464 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 GFYI3L273 518 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 ERVH48-1M5A8F1 160 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 TERTO14746 1132 aaKnown RBP11.45□□□□□ -0.58
YBX3-217ENST00000546164 CPNE3O75131 537 aaKnown RBP11.45□□□□□ -0.58
YBX3-217ENST00000546164 VPS26AO75436 327 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 AHSGP02765 367 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 GABRA4P48169 554 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 CARSP49589 748 aaKnown RBP11.45□□□□□ -0.58
YBX3-217ENST00000546164 TIAL1Q01085 375 aaKnown RBP eCLIP11.45□□□□□ -0.58
YBX3-217ENST00000546164 CAV1Q03135 178 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 MGAT5Q09328 741 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 ARHGAP19Q14CB8 494 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 FASTKD3Q14CZ7 662 aaKnown RBP11.45□□□□□ -0.58
YBX3-217ENST00000546164 ZIC1Q15915 447 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 CYP2A13Q16696 494 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 CCSMST1Q4G0I0 132 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 CRTC2Q53ET0 693 aaPredicted RBP11.45□□□□□ -0.58
YBX3-217ENST00000546164 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.45□□□□□ -0.58
YBX3-217ENST00000546164 HP1BP3Q5SSJ5 553 aaPredicted RBP11.45□□□□□ -0.58
YBX3-217ENST00000546164 KIAA1614Q5VZ46 1190 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 LRRC8EQ6NSJ5 796 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 UGT3A1Q6NUS8 523 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 CYHR1Q6ZMK1 362 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 ZNF517Q6ZMY9 492 aaPredicted RBP11.45□□□□□ -0.58
YBX3-217ENST00000546164 CDHR3Q6ZTQ4 885 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 ZSCAN1Q8NBB4 408 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 GALNT6Q8NCL4 622 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 OR9A1PQ8NGU1 263 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 OR1L3Q8NH93 324 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 ASB11Q8WXH4 323 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 TTC9Q92623 222 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 SLC12A9Q9BXP2 914 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 FAM117AQ9C073 453 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 DPH5Q9H2P9 285 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 GPN2Q9H9Y4 310 aaPredicted RBP11.45□□□□□ -0.58
YBX3-217ENST00000546164 FAM60AQ9NP50 221 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 WDR70Q9NW82 654 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 TAS2R13Q9NYV9 303 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 CIDEBQ9UHD4 219 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 PADI1Q9ULC6 663 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 UTP11Q9Y3A2 253 aaKnown RBP11.45□□□□□ -0.58
YBX3-217ENST00000546164 KLK4Q9Y5K2 254 aa11.45□□□□□ -0.58
YBX3-217ENST00000546164 CFAP46Q8IYW2 2715 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms