RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 CDHR1Q96JP9 859 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 CSF3RQ99062 836 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 MTERF1Q99551 399 aaKnown RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 FEVQ99581 238 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 CPNE1Q99829 537 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 WACQ9BTA9 647 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 EBF3Q9H4W6 596 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 ADPRHL2Q9NX46 363 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 C1RLQ9NZP8 487 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 KLHL9Q9P2J3 617 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 GAGE2DQ9UEU5 116 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 POLLQ9UGP5 575 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 ARMCX3Q9UH62 379 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 CDH7Q9ULB5 785 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 KIAA1210Q9ULL0 1709 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 CICQ96RK0 1608 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-222ENST00000545308 UBR3Q6ZT12 1888 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 LTN1O94822 1766 aa3.94□□□□□ -1.78
SNHG1-222ENST00000545308 PKD1L3Q7Z443 1732 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 KTN1Q86UP2 1357 aaKnown RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 IGLV5-39A0A0G2JS06 123 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 GOLGA6L9A6NEM1 432 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 INAFM1C9JVW0 142 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 MEIS2O14770 477 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 IFIT3O14879 490 aaKnown RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 ZNF263O14978 683 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 ASAP2O43150 1006 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 SPRY3O43610 288 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 SLC22A3O75751 556 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 SNRNP70P08621 437 aaKnown RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 MMP10P09238 476 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 HOXB2P14652 356 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 DPEP1P16444 411 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 GNAZP19086 355 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 CD22P20273 847 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 SSTR2P30874 369 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 CORO1AP31146 461 aaKnown RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 CLCNKAP51800 687 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 CTSCP53634 463 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 ADARP55265 1226 aaKnown RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 FOXG1P55316 489 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 KRTAP10-6P60371 365 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 ABATP80404 500 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 COG7P83436 770 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 RUNX1T1Q06455 604 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 PNRC1Q12796 327 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 LASP1Q14847 261 aaKnown RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 PRTGQ2VWP7 1150 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 LBHQ53QV2 105 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 SFMBT2Q5VUG0 894 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 OTUD1Q5VV17 481 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 SHEQ5VZ18 495 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 TATDN1Q6P1N9 297 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 NHLRC1Q6VVB1 395 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 TMEM182Q6ZP80 229 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 C15orf39Q6ZRI6 1047 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 C11orf57Q6ZUT1 292 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 SPATA21Q7Z572 469 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 TECPR1Q7Z6L1 1165 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 C10orf53Q8N6V4 93 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 OR8H1Q8NGG4 311 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 CTCFLQ8NI51 663 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 SEPT1Q8WYJ6 367 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 TXNDC15Q96J42 360 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 CAMK1GQ96NX5 476 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 PARK7Q99497 189 aaKnown RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 SEPHS2Q99611 448 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 INPP5KQ9BT40 448 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 MMTAG2Q9BU76 263 aaKnown RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 FNDC11Q9BVV2 318 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 FOXP1Q9H334 677 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 HHATLQ9HCP6 504 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 NPAP1Q9NZP6 1156 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 CNIH4Q9P003 139 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 SEPT10Q9P0V9 454 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 ACAD8Q9UKU7 415 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 AGO1Q9UL18 857 aaKnown RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 SNX7Q9UNH6 387 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 PADI2Q9Y2J8 665 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 PCDHGA1Q9Y5H4 931 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 ITGB4P16144 1822 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 VIRMAQ69YN4 1812 aaKnown RBP3.93□□□□□ -1.78
SNHG1-222ENST00000545308 ADGRB1O14514 1584 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 PCDH11XQ9BZA7 1347 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 PCDH11YQ9BZA8 1340 aa3.93□□□□□ -1.78
SNHG1-222ENST00000545308 BRCA1P38398 1863 aaKnown RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 NSD2O96028 1365 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 CNTNAP1P78357 1384 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 RPS10-NUDT3A0A1W2PQS6 291 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 FAM90A10PA6NDY2 464 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 C5orf52A6NGY3 159 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 CLDN4O14493 209 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 SLC30A4O14863 429 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 ST8SIA3O43173 380 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 HTATSF1O43719 755 aaKnown RBP3.92□□□□□ -1.78
SNHG1-222ENST00000545308 TSPAN1O60635 241 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 GCNT3O95395 438 aa3.92□□□□□ -1.78
SNHG1-222ENST00000545308 ACSL3O95573 720 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms