RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 KIAA1191Q96A73 305 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PTERQ96BW5 349 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ZDHHC12Q96GR4 267 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SCYL1Q96KG9 808 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TGM7Q96PF1 710 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 EGFL8Q99944 293 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 DPYSL5Q9BPU6 564 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 MENTQ9BUN1 341 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 KLHL3Q9UH77 587 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 LGALS13Q9UHV8 139 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 RNF112Q9ULX5 631 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 OARD1Q9Y530 152 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CEP250Q9BV73 2442 aa14.03□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NCF1BA6NI72 391 aaPredicted RBP14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ZNF839A8K0R7 811 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NCF1CA8MVU1 366 aaPredicted RBP14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 C2orf74A8MZ97 194 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ISM1B1AKI9 464 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 MATN2O00339 956 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CHRM5P08912 532 aaPredicted RBP14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NCF1P14598 390 aaPredicted RBP14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 MPSTP25325 297 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 KPNA2P52292 529 aaKnown RBP14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PNLIPRP1P54315 467 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 GFERP55789 205 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 AP1S2P56377 157 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CFHR1Q03591 330 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SQSTM1Q13501 440 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 OR4D1Q15615 310 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PPP1R3AQ16821 1122 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TSNAXIP1Q2TAA8 658 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SNAP47Q5SQN1 464 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TMEM71Q6P5X7 295 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 DGLUCYQ7Z3D6 616 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ISCA2Q86U28 154 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 GPSM1Q86YR5 675 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ADGRF3Q8IZF5 1079 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 LMNTD1Q8N9Z9 388 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PPFIBP2Q8ND30 876 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 OR4D9Q8NGE8 314 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 DENND1AQ8TEH3 1009 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ABCF3Q9NUQ8 709 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TMEM9Q9P0T7 183 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CLCA2Q9UQC9 943 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 ENTPD2Q9Y5L3 495 aa14.02□□□□□ -0.16
TNFRSF1A-216ENST00000543995 A8MU76 341 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SUPT3HB4E1H0 165 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 RGS16O15492 202 aaPredicted RBP14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SUPT3HO75486 399 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 RASSF9O75901 435 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TOP3BO95985 862 aaKnown RBP14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 S100BP04271 92 aaPredicted RBP14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ANXA5P08758 320 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 HOXB3P14651 431 aaPredicted RBP14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 KRT4P19013 534 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PPP1CAP62136 330 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 FASTKQ14296 549 aaKnown RBP14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ARHGAP19Q14CB8 494 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TGFBIQ15582 683 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CYP2A13Q16696 494 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PHF19Q5T6S3 580 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 FAM92BQ6ZTR7 304 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 HDXQ7Z353 690 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TMPRSS9Q7Z410 1059 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 LINC01555Q8NAE3 123 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ZNF480Q8WV37 535 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ADAMTS14Q8WXS8 1223 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ALKBH8Q96BT7 664 aaKnown RBP14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TMEM74Q96NL1 305 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 DEPDC7Q96QD5 511 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SEMA6CQ9H3T2 930 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ZNF358Q9NW07 568 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ACTR10Q9NZ32 417 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CD274Q9NZQ7 290 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 STOX2Q9P2F5 926 aaPredicted RBP14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PCM1Q15154 2024 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PIEZO1Q92508 2521 aa14.01□□□□□ -0.17
TNFRSF1A-216ENST00000543995 GOLGA6L10A6NI86 522 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 KERAO60938 352 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 MT-CO3P00414 261 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 C9P02748 559 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 RBP1P09455 135 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ERGP11308 486 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 JUPP14923 745 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 IMPA1P29218 277 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 PRDX3P30048 256 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 KIR2DS3Q14952 304 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 N4BP2L1Q5TBK1 243 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 AGTRAPQ6RW13 159 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SUSD1Q6UWL2 747 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ZNF574Q6ZN55 896 aaPredicted RBP14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CLEC14AQ86T13 490 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 TMPRSS12Q86WS5 348 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SRRM1Q8IYB3 904 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 GALNT15Q8N3T1 639 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 CHCHD4Q8N4Q1 142 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 RHEBL1Q8TAI7 183 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 HMGCLL1Q8TB92 370 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 ATL1Q8WXF7 558 aa14□□□□□ -0.17
TNFRSF1A-216ENST00000543995 SMPDL3AQ92484 453 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms