RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TLE2Q04725 743 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 RASGEF1BQ0VAM2 473 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 DUOXA2Q1HG44 320 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 XKR4Q5GH76 650 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 UBXN11Q5T124 520 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 NADSYN1Q6IA69 706 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 TTC27Q6P3X3 843 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 KLHL24Q6TFL4 600 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 C17orf107Q6ZR85 190 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 SEPT12Q8IYM1 358 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 CLYBLQ8N0X4 340 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 STOML3Q8TAV4 291 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 LRRC15Q8TF66 581 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 CITED2Q99967 270 aaPredicted RBP8.71□□□□□ -1.01
VPS13D-212ENST00000543766 MGME1Q9BQP7 344 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 C17orf75Q9HAS0 396 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 TMEM138Q9NPI0 162 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 SYNGAP1Q96PV0 1343 aa8.71□□□□□ -1.01
VPS13D-212ENST00000543766 A0A1B0GVC2 190 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 DVL2O14641 736 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 GYG2O15488 501 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 LZTS3O60299 673 aaPredicted RBP8.71□□□□□ -1.02
VPS13D-212ENST00000543766 OR10H3O60404 316 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 IPO13O94829 963 aaKnown RBP8.71□□□□□ -1.02
VPS13D-212ENST00000543766 NXPH2O95156 264 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 DEXIO95424 95 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 TXNDC12O95881 172 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 CBSLP0DN79 551 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 CYP4B1P13584 511 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 PCSK1P29120 753 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 CBSP35520 551 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 MLLT10P55197 1068 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 ASIC1P78348 528 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 FGL1Q08830 312 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF169Q14929 603 aaPredicted RBP8.71□□□□□ -1.02
VPS13D-212ENST00000543766 RPS6KA1Q15418 735 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 TAZQ16635 292 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 SLC9B1Q4ZJI4 515 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 CARD16Q5EG05 197 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 PCID2Q5JVF3 399 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 ADGRD2Q7Z7M1 963 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF410Q86VK4 478 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 SLC22A16Q86VW1 577 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 UNC5BQ8IZJ1 945 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 SIMC1Q8NDZ2 872 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 C2CD4CQ8TF44 421 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 P2RX5Q93086 422 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 DCPSQ96C86 337 aaKnown RBP8.71□□□□□ -1.02
VPS13D-212ENST00000543766 DUS3LQ96G46 650 aaKnown RBP8.71□□□□□ -1.02
VPS13D-212ENST00000543766 GCNAQ96QF7 691 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 MFRPQ9BY79 579 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 NIF3L1Q9GZT8 377 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 SLC5A7Q9GZV3 580 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 OR51M1Q9H341 326 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 KCNK9Q9NPC2 374 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 EXD2Q9NVH0 621 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 AHSPQ9NZD4 102 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 ADAM28Q9UKQ2 775 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 PCDHAC2Q9Y5I4 1007 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 TNPO3Q9Y5L0 923 aaKnown RBP8.71□□□□□ -1.02
VPS13D-212ENST00000543766 CPQQ9Y646 472 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 DOT1LQ8TEK3 1739 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 ADGRA3Q8IWK6 1321 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 PRAMEF27A3QJZ7 478 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 FAM187AA6NFU0 413 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 PRAMEF25A6NGN4 478 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 POTEMA6NI47 508 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 SAGE2PA6NJ88 616 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 PRAMEF26H0Y7S4 382 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 KCNK3O14649 394 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 PRAMEF4O60810 478 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 PRAMEF11O60813 436 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 GH1P01241 217 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 SERPING1P05155 500 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 TFAP2AP05549 437 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 NID1P14543 1247 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 IL2RBP14784 551 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 KCNQ4P56696 695 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 GHRHRQ02643 423 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 SCGB2A2Q13296 93 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 ACOX1Q15067 660 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 ADIPOQQ15848 244 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 USP41Q3LFD5 358 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 PRAMEF5Q5TYX0 476 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 PRAMEF9Q5VWM5 478 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 PRAMEF6Q5VXH4 476 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 DMRTA1Q5VZB9 504 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 POTEGQ6S5H5 508 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 AMIGO2Q86SJ2 522 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 ANKRD46Q86W74 232 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 SLC13A3Q8WWT9 602 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 WFDC12Q8WWY7 111 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 TTC9Q92623 222 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 NUDT11Q96G61 164 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 C7orf26Q96N11 449 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 SERPINI1Q99574 410 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 ATG101Q9BSB4 218 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 TRIM51Q9BSJ1 452 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 FZD10Q9ULW2 581 aa8.71□□□□□ -1.02
VPS13D-212ENST00000543766 MTO1Q9Y2Z2 717 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms