RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ENTPD2Q9Y5L3 495 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 CABIN1Q9Y6J0 2220 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 AK5Q9Y6K8 562 aa6.12□□□□□ -1.43
LTBR-212ENST00000543542 PTPRBP23467 1997 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 CCDC187A0A096LP49 1063 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 IGHV5-10-1A0A0J9YXX1 117 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 CCDC151A5D8V7 595 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 TLCD2A6NGC4 264 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 GOLGA6L10A6NI86 522 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 EFCAB7A8K855 629 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 SYCE1LA8MT33 242 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 GFYI3L273 518 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 GOLGA8RI6L899 631 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 MYO1CO00159 1063 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 KIF1CO43896 1103 aaKnown RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 KLHL2O95198 593 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 CCNDBP1O95273 360 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 TSPAN12O95859 305 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 SLC16A8O95907 504 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 TOP3BO95985 862 aaKnown RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 ALDOAP04075 364 aaKnown RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 ADRB1P08588 477 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 NUDT17P0C025 328 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 MYZAPP0CAP1 466 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 SLC35E2BP0CK96 405 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 THRAP10827 490 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 CD1DP15813 335 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 UGT2B7P16662 529 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 GCAP28676 217 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 RBMS1P29558 406 aaKnown RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 OAS2P29728 719 aaKnown RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 PRDX3P30048 256 aaKnown RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 CMPK1P30085 196 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 GMPRP36959 345 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 SLC26A3P40879 764 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 MLLT3P42568 568 aaPredicted RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 MAPK10P53779 464 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 AP1S2P56377 157 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 PPP1CAP62136 330 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 IRF9Q00978 393 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 FOXM1Q08050 763 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 SQSTM1Q13501 440 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 TRA2AQ13595 282 aaKnown RBP eCLIP6.11□□□□□ -1.43
LTBR-212ENST00000543542 KIR2DS3Q14952 304 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 ARHGAP19Q14CB8 494 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 ACAP2Q15057 778 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 TSNQ15631 228 aaKnown RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 ZKSCAN8Q15776 578 aaPredicted RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 PHKG1Q16816 387 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 TSNAXIP1Q2TAA8 658 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 KRT71Q3SY84 523 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 CDCP2Q5VXM1 449 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 AGTRAPQ6RW13 159 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 SPESP1Q6UW49 350 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 SUSD1Q6UWL2 747 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 MBOAT1Q6ZNC8 495 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 RAB11FIP2Q7L804 512 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 TMPRSS7Q7RTY8 843 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 ADCK2Q7Z695 626 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 MARCH9Q86YJ5 346 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 GPSM1Q86YR5 675 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 ADGRF3Q8IZF5 1079 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 RIBC1Q8N443 379 aaPredicted RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 MREGQ8N565 214 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 LMNTD1Q8N9Z9 388 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 CCDC63Q8NA47 563 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 FBXO15Q8NCQ5 510 aaPredicted RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 AGBL5Q8NDL9 886 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 WDR36Q8NI36 951 aaKnown RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 STAG3L4Q8TBR4 150 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 SMPDL3AQ92484 453 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 ANKRD7Q92527 254 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 ZBTB9Q96C00 473 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 NXNL1Q96CM4 212 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 GRAMD1AQ96CP6 724 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 CD180Q99467 661 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 MAP3K3Q99759 626 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 MIPEPQ99797 713 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 DHRS4Q9BTZ2 278 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 ACAT2Q9BWD1 397 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 SLC12A9Q9BXP2 914 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 ROPN1BQ9BZX4 212 aaPredicted RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 RAB33BQ9H082 229 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 IQCGQ9H095 443 aaKnown RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 KLHL25Q9H0H3 589 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 ATG10Q9H0Y0 220 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 EPB41L4BQ9H329 900 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 ALG9Q9H6U8 611 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 ROPN1Q9HAT0 212 aaPredicted RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 CCDC177Q9NQR7 707 aaPredicted RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 IRAK4Q9NWZ3 460 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 SPHK1Q9NYA1 384 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 WWOXQ9NZC7 414 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 OGFRQ9NZT2 677 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 STOX2Q9P2F5 926 aaPredicted RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 CPSF2Q9P2I0 782 aaKnown RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 PISDQ9UG56 409 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 KLK13Q9UKR3 277 aa6.11□□□□□ -1.43
LTBR-212ENST00000543542 NOVA2Q9UNW9 492 aaKnown RBP6.11□□□□□ -1.43
LTBR-212ENST00000543542 DYRK1BQ9Y463 629 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms