RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 NUP98P52948 1817 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 INHAP05111 366 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 SLC2A2P11168 524 aaPredicted RBP18.97■□□□□ 0.63
SUDS3-204ENST00000543473 TGFBR2P37173 567 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 DUSP4Q13115 394 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 LAPTM4AQ15012 233 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 TAS1R3Q7RTX0 852 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 FAM220AQ7Z4H9 259 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 IL4I1Q96RQ9 567 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 MCMBPQ9BTE3 642 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 RUVBL1Q9Y265 456 aaKnown RBP18.97■□□□□ 0.63
SUDS3-204ENST00000543473 SPIN1Q9Y657 262 aaPredicted RBP18.97■□□□□ 0.63
SUDS3-204ENST00000543473 MYH7P12883 1935 aa18.97■□□□□ 0.63
SUDS3-204ENST00000543473 RFC2P35250 354 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 ZNF252P-AS1Q0IIN9 211 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 INCA1Q0VD86 236 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 C15orf39Q6ZRI6 1047 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 C2CD4AQ8NCU7 369 aaPredicted RBP18.96■□□□□ 0.63
SUDS3-204ENST00000543473 CEP295NLQ96MC4 621 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 CCDC3Q9BQI4 270 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 NEK6Q9HC98 313 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 CARNS1A5YM72 827 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 ENPP3O14638 875 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 PPEF2O14830 753 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 CTNNB1P35222 781 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 PUDPQ08623 228 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.96■□□□□ 0.63
SUDS3-204ENST00000543473 NAPRTQ6XQN6 538 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 CYP2U1Q7Z449 544 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 OSBPL2Q9H1P3 480 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 EVLQ9UI08 416 aaPredicted RBP18.96■□□□□ 0.63
SUDS3-204ENST00000543473 SLC45A1Q9Y2W3 748 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 ATF6P18850 670 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 RPL4P36578 427 aaKnown RBP18.96■□□□□ 0.63
SUDS3-204ENST00000543473 MYBPC1Q00872 1141 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 TSTQ16762 297 aaKnown RBP18.96■□□□□ 0.63
SUDS3-204ENST00000543473 ZNF438Q7Z4V0 828 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 UFD1Q92890 307 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 SLC38A4Q969I6 547 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 COL21A1Q96P44 957 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 UNCXA6NJT0 531 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 MYF6P23409 242 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 DCDC1P59894 354 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 RHAGQ02094 409 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 ZNF45Q02386 682 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 ZNF655Q8N720 491 aaPredicted RBP18.96■□□□□ 0.63
SUDS3-204ENST00000543473 CORO1BQ9BR76 489 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 ANKRD60Q9BZ19 345 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 XYLT2Q9H1B5 865 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 IGFLR1Q9H665 355 aa18.96■□□□□ 0.63
SUDS3-204ENST00000543473 ARL5CA6NH57 179 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 OR6A2O95222 327 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 SLC35E2BP0CK96 405 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 OMPP47874 163 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 ASCC1Q8N9N2 400 aaKnown RBP18.95■□□□□ 0.62
SUDS3-204ENST00000543473 POLR2J3Q9H1A7 115 aaKnown RBP18.95■□□□□ 0.62
SUDS3-204ENST00000543473 CCDC177Q9NQR7 707 aaPredicted RBP18.95■□□□□ 0.62
SUDS3-204ENST00000543473 ASF1AQ9Y294 204 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 ISPDA4D126 451 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 FAM86C2PA6NEL3 165 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 ITGB1P05556 798 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 NIPAL4Q0D2K0 466 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 POM121L1PQ3SYA9 428 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 SPANXN4Q5MJ08 99 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 KIAA1614Q5VZ46 1190 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 STEAP4Q687X5 459 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 CILP2Q8IUL8 1156 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 SCAMP5Q8TAC9 235 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 TMLHEQ9NVH6 421 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 CHRNA1P02708 482 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 ENGP17813 658 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 PRPS1L1P21108 318 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 PGGT1BP53609 377 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 SLC10A2Q12908 348 aaPredicted RBP18.95■□□□□ 0.62
SUDS3-204ENST00000543473 SIRPB2Q5JXA9 342 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 FAM180AQ6UWF9 173 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 TMEM135Q86UB9 458 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 NPY6RQ99463 290 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 KCNN2Q9H2S1 579 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 UCKL1Q9NWZ5 548 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 BMP2P12643 396 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 GCAP28676 217 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 CSTF2P33240 577 aaKnown RBP eCLIP18.95■□□□□ 0.62
SUDS3-204ENST00000543473 ABHD18Q0P651 414 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 SLC9A5Q14940 896 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 ANKRD13BQ86YJ7 626 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 MOSPD2Q8NHP6 518 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 SIPA1Q96FS4 1042 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 KCTD7Q96MP8 289 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 SLC29A1Q99808 456 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 FUNDC2Q9BWH2 189 aa18.95■□□□□ 0.62
SUDS3-204ENST00000543473 FAUP35544 74 aaKnown RBP18.94■□□□□ 0.62
SUDS3-204ENST00000543473 MSANTD2Q6P1R3 559 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 CNIH3Q8TBE1 160 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 RFKQ969G6 155 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 KIAA1191Q96A73 305 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 PAK1IP1Q9NWT1 392 aaPredicted RBP18.94■□□□□ 0.62
SUDS3-204ENST00000543473 CCR4P51679 360 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 RPS3AP61247 264 aaKnown RBP18.94■□□□□ 0.62
SUDS3-204ENST00000543473 NFKB2Q00653 900 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms