RNA–Protein interactions for RNA: ENST00000543042.5

CLPB-212, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-212ENST00000543042 KIAA0040Q15053 153 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 SAMD4BQ5PRF9 694 aaKnown RBP17.47■□□□□ 0.39
CLPB-212ENST00000543042 ADNP2Q6IQ32 1131 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 ZNF765Q7L2R6 523 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 HDDC3Q8N4P3 179 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 MINDY1Q8N5J2 469 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 HOPXQ9BPY8 73 aaPredicted RBP17.47■□□□□ 0.39
CLPB-212ENST00000543042 ELOVL6Q9H5J4 265 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 PIF1Q9H611 641 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 COPS7BQ9H9Q2 264 aaPredicted RBP17.47■□□□□ 0.39
CLPB-212ENST00000543042 MBNL1Q9NR56 388 aaKnown RBP17.47■□□□□ 0.39
CLPB-212ENST00000543042 DLGAP4Q9Y2H0 992 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 CCDC85CA6NKD9 419 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 KRT6AP02538 564 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 KRT6BP04259 564 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 ATP6V1C1P21283 382 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 EIF2DP41214 584 aaKnown RBP17.47■□□□□ 0.39
CLPB-212ENST00000543042 KIR2DL1P43626 348 aaPredicted RBP17.47■□□□□ 0.39
CLPB-212ENST00000543042 KRT6CP48668 564 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 TRIP10Q15642 601 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 WSCD2Q2TBF2 565 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 TRMT11Q7Z4G4 463 aaKnown RBP17.47■□□□□ 0.39
CLPB-212ENST00000543042 C11orf96Q7Z7L8 435 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 IFNEQ86WN2 208 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 HEATR4Q86WZ0 1026 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 L3MBTL4Q8NA19 623 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 MKRN2Q9H000 416 aaKnown RBP17.47■□□□□ 0.39
CLPB-212ENST00000543042 RSPH9Q9H1X1 276 aaPredicted RBP17.47■□□□□ 0.39
CLPB-212ENST00000543042 ABCD2Q9UBJ2 740 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 SLC23A2Q9UGH3 650 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 PCDHA9Q9Y5H5 950 aa17.47■□□□□ 0.39
CLPB-212ENST00000543042 SH3BGRLO75368 114 aa17.46■□□□□ 0.39
CLPB-212ENST00000543042 C1orf105O95561 183 aa17.46■□□□□ 0.39
CLPB-212ENST00000543042 CATP04040 527 aaKnown RBP17.46■□□□□ 0.39
CLPB-212ENST00000543042 BCL7AQ4VC05 210 aa17.46■□□□□ 0.39
CLPB-212ENST00000543042 SFT2D3Q587I9 215 aa17.46■□□□□ 0.39
CLPB-212ENST00000543042 TMEM125Q96AQ2 219 aa17.46■□□□□ 0.39
CLPB-212ENST00000543042 APIPQ96GX9 242 aa17.46■□□□□ 0.39
CLPB-212ENST00000543042 HIC2Q96JB3 615 aa17.46■□□□□ 0.39
CLPB-212ENST00000543042 CCDC138Q96M89 665 aa17.46■□□□□ 0.39
CLPB-212ENST00000543042 ZNF184Q99676 751 aaPredicted RBP17.46■□□□□ 0.39
CLPB-212ENST00000543042 SLC29A3Q9BZD2 475 aa17.46■□□□□ 0.39
CLPB-212ENST00000543042 EPHX3Q9H6B9 360 aa17.46■□□□□ 0.39
CLPB-212ENST00000543042 GID8Q9NWU2 228 aa17.46■□□□□ 0.39
CLPB-212ENST00000543042 PSMD13Q9UNM6 376 aa17.46■□□□□ 0.39
CLPB-212ENST00000543042 RNASEH2AO75792 299 aaKnown RBP17.45■□□□□ 0.38
CLPB-212ENST00000543042 PAK4O96013 591 aaPredicted RBP17.45■□□□□ 0.38
CLPB-212ENST00000543042 TACR1P25103 407 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 GTF2A1P52655 376 aaPredicted RBP17.45■□□□□ 0.38
CLPB-212ENST00000543042 TSTA3Q13630 321 aaPredicted RBP17.45■□□□□ 0.38
CLPB-212ENST00000543042 ENPP2Q13822 863 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 FGL2Q14314 439 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 SF1Q15637 639 aaKnown RBP17.45■□□□□ 0.38
CLPB-212ENST00000543042 XKR6Q5GH73 641 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 FAM46CQ5VWP2 391 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 PNCKQ6P2M8 343 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 PQLC1Q8N2U9 271 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 TSPEARQ8WU66 669 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 PKP2Q99959 881 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 C1orf109Q9NX04 203 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 LEF1Q9UJU2 399 aaPredicted RBP17.45■□□□□ 0.38
CLPB-212ENST00000543042 EIF3LQ9Y262 564 aaKnown RBP17.45■□□□□ 0.38
CLPB-212ENST00000543042 OR1A2Q9Y585 309 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 BCKDHAP12694 445 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 ATP6V1B2P21281 511 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 IRF8Q02556 426 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 CAMK2GQ13555 558 aaPredicted RBP17.45■□□□□ 0.38
CLPB-212ENST00000543042 DOC2AQ14183 400 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 COQ5Q5HYK3 327 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 NANOGP8Q6NSW7 305 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 DLEU7Q6UYE1 221 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 PHC3Q8NDX5 983 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 ZNF480Q8WV37 535 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 SLCO4A1Q96BD0 722 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 RSRC1Q96IZ7 334 aaKnown RBP17.45■□□□□ 0.38
CLPB-212ENST00000543042 PPM1MQ96MI6 270 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 MTERF1Q99551 399 aaKnown RBP17.45■□□□□ 0.38
CLPB-212ENST00000543042 NANOGQ9H9S0 305 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 SH2B3Q9UQQ2 575 aa17.45■□□□□ 0.38
CLPB-212ENST00000543042 B3GALT4O96024 378 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 VARSP26640 1264 aaKnown RBP17.44■□□□□ 0.38
CLPB-212ENST00000543042 DDX39BQ13838 428 aaKnown RBP17.44■□□□□ 0.38
CLPB-212ENST00000543042 SELPLGQ14242 412 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 INPP5AQ14642 412 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 MAP7D1Q3KQU3 841 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 FAM174BQ3ZCQ3 159 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 GGTA1PQ4G0N0 100 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 USP39Q53GS9 565 aaKnown RBP17.44■□□□□ 0.38
CLPB-212ENST00000543042 IER5LQ5T953 404 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 TTC23LQ6PF05 361 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 C2orf73Q8N5S3 287 aaPredicted RBP17.44■□□□□ 0.38
CLPB-212ENST00000543042 RAB7BQ96AH8 199 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 COX14Q96I36 57 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 EGLN2Q96KS0 407 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 FOPNLQ96NB1 174 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 ECSITQ9BQ95 431 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 OSBPL6Q9BZF3 934 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 ZCCHC2Q9C0B9 1178 aaKnown RBP17.44■□□□□ 0.38
CLPB-212ENST00000543042 SNX6Q9UNH7 406 aa17.44■□□□□ 0.38
CLPB-212ENST00000543042 ZFR2Q9UPR6 939 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms