RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 PRDX3P30048 256 aaKnown RBP16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 SLC26A3P40879 764 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 ATP6V0D1P61421 351 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 PHKG1Q16816 387 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 CACHD1Q5VU97 1274 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 SBSNQ6UWP8 590 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 RAB11FIP2Q7L804 512 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 TBC1D1Q86TI0 1168 aaPredicted RBP16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 CNPY4Q8N129 248 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 MREGQ8N565 214 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 LMNTD1Q8N9Z9 388 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 WDR36Q8NI36 951 aaKnown RBP16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 SLC22A18Q96BI1 424 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 CCDC138Q96M89 665 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 MAP3K3Q99759 626 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 CMKLR1Q99788 373 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 TRIM54Q9BYV2 358 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 NRSN2Q9GZP1 204 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 PPCSQ9HAB8 311 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 AKAP7Q9P0M2 348 aaPredicted RBP16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 CTNNAL1Q9UBT7 734 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 TLK1Q9UKI8 766 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 ACOT9Q9Y305 439 aa16.55■□□□□ 0.24
RABGGTA-203ENST00000543002 A0A087X1B8 175 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 A0A1W2PNU3 283 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 NPEPPSL1A6NEC2 478 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 ZNF839A8K0R7 811 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 ISM1B1AKI9 464 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 TRIM49D1C9J1S8 452 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 SLC16A8O95907 504 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 HIST1H2AGP0C0S8 130 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 CD1DP15813 335 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 UGT2B7P16662 529 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 HIST1H2ADP20671 130 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 PEBP1P30086 187 aaKnown RBP16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 CSTF2P33240 577 aaKnown RBP eCLIP16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 MAGEA12P43365 314 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 PNLIPRP1P54315 467 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 AP1S2P56377 157 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 CSHL1Q14406 222 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 PPP1R3AQ16821 1122 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 TAF1BQ53T94 588 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 SPESP1Q6UW49 350 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 ADAMTSL2Q86TH1 951 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 SPATA6LQ8N4H0 392 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 C2orf73Q8N5S3 287 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 AGBL5Q8NDL9 886 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 FLVCR1-AS1Q8TAF5 88 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 ZNF480Q8WV37 535 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 KLHL6Q8WZ60 621 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 HIST1H2AHQ96KK5 128 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 OR2A14Q96R47 310 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 HIST1H2AJQ99878 128 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 H2AFJQ9BTM1 129 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 PITPNM3Q9BZ71 974 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 ZNF768Q9H5H4 540 aaKnown RBP16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 C1GALT1Q9NS00 363 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 PSMC3IPQ9P2W1 217 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 LOXL2Q9Y4K0 774 aa16.54■□□□□ 0.24
RABGGTA-203ENST00000543002 A0A096LPK6 155 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 IGHV5-51A0A0C4DH38 117 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 IQANK1A0A1B0GTG1 560 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 PABPN1LA6NDY0 278 aaKnown RBP16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 TRABD2BA6NFA1 517 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 PLD2O14939 933 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 PRICKLE3O43900 615 aaPredicted RBP16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 LTA4HP09960 611 aaKnown RBP16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 NUDT17P0C025 328 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 CDH3P22223 829 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 OAS2P29728 719 aaKnown RBP16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 GMPRP36959 345 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 LSSP48449 732 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 FASTKQ14296 549 aaKnown RBP16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 TSNQ15631 228 aaKnown RBP16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 SLC5A12Q1EHB4 618 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 C3orf38Q5JPI3 329 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 FBXO38Q6PIJ6 1188 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 TIFABQ6ZNK6 161 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 TAX1BP1Q86VP1 789 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 KMT5CQ86Y97 462 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 TDRPQ86YL5 185 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 FBXO39Q8N4B4 442 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 SMPDL3AQ92484 453 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 MTBPQ96DY7 904 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 PPM1MQ96MI6 270 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 UNKQ9C0B0 810 aaKnown RBP16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 POLR1BQ9H9Y6 1135 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 NMRAL1Q9HBL8 299 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 STOX2Q9P2F5 926 aaPredicted RBP16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 SATB2Q9UPW6 733 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 PCDHGA8Q9Y5G5 932 aa16.53■□□□□ 0.24
RABGGTA-203ENST00000543002 KIF26BQ2KJY2 2108 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 A0A1W2PPV9 198 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 E7ENX8 843 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 MPOP05164 745 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 NELFEP18615 380 aaKnown RBP16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 IMPA1P29218 277 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 SEPHS1P49903 392 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 CDKL1Q00532 357 aa16.52■□□□□ 0.24
RABGGTA-203ENST00000543002 IRF9Q00978 393 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms