RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 DENND1AQ8TEH3 1009 aa16.6■□□□□ 0.25
LIG1-204ENST00000542460 ZNF480Q8WV37 535 aa16.6■□□□□ 0.25
LIG1-204ENST00000542460 NCSTNQ92542 709 aa16.6■□□□□ 0.25
LIG1-204ENST00000542460 ZBTB9Q96C00 473 aa16.6■□□□□ 0.25
LIG1-204ENST00000542460 IL17FQ96PD4 163 aa16.6■□□□□ 0.25
LIG1-204ENST00000542460 NRTNQ99748 197 aa16.6■□□□□ 0.25
LIG1-204ENST00000542460 STMN4Q9H169 189 aaPredicted RBP16.6■□□□□ 0.25
LIG1-204ENST00000542460 ZNF358Q9NW07 568 aa16.6■□□□□ 0.25
LIG1-204ENST00000542460 OGFRQ9NZT2 677 aa16.6■□□□□ 0.25
LIG1-204ENST00000542460 GOLGA4Q13439 2230 aaKnown RBP16.6■□□□□ 0.25
LIG1-204ENST00000542460 DCDC2BA2VCK2 349 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 OR5K3A6NET4 321 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 SYCE1LA8MT33 242 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 BTN3A3O00478 584 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 NTN3O00634 580 aaPredicted RBP16.59■□□□□ 0.25
LIG1-204ENST00000542460 KERAO60938 352 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 DKK1O94907 266 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 CPNE6O95741 557 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 GUCA1CO95843 209 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 ANXA5P08758 320 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 FTH1P19P0C7X4 201 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 ERGP11308 486 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 KCNC1P48547 511 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 PRKAA1Q13131 559 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 TNFAIP8L3Q5GJ75 292 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 CDKL4Q5MAI5 379 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 ARMC6Q6NXE6 501 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 WDR74Q6RFH5 385 aaPredicted RBP16.59■□□□□ 0.25
LIG1-204ENST00000542460 USP53Q70EK8 1073 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 ADGRF3Q8IZF5 1079 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 C4orf33Q8N1A6 199 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 ATL1Q8WXF7 558 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 RSC1A1Q92681 617 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 SCYL1Q96KG9 808 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 PKNOX2Q96KN3 472 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 GFM1Q96RP9 751 aaKnown RBP16.59■□□□□ 0.25
LIG1-204ENST00000542460 SMC6Q96SB8 1091 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 ATOH8Q96SQ7 321 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 DPYSL5Q9BPU6 564 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 MRPL57Q9BQC6 102 aaKnown RBP16.59■□□□□ 0.25
LIG1-204ENST00000542460 RAB33BQ9H082 229 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 ENTPD2Q9Y5L3 495 aa16.59■□□□□ 0.25
LIG1-204ENST00000542460 AGPSO00116 658 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 MATN2O00339 956 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 COPEO14579 308 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 MAP2K7O14733 419 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 GLRA3O75311 464 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 CHRM5P08912 532 aaPredicted RBP16.58■□□□□ 0.24
LIG1-204ENST00000542460 POLR2CP19387 275 aaPredicted RBP16.58■□□□□ 0.24
LIG1-204ENST00000542460 IMPA1P29218 277 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 CRHR1P34998 444 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 HNMTP50135 292 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 PNLIPRP1P54315 467 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 SPIDRQ14159 915 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 TECRLQ5HYJ1 363 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 MBOAT1Q6ZNC8 495 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 PLXDC1Q8IUK5 500 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 SYTL1Q8IYJ3 562 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 LINC01555Q8NAE3 123 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 ALKBH8Q96BT7 664 aaKnown RBP16.58■□□□□ 0.24
LIG1-204ENST00000542460 EGFL8Q99944 293 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 SYNDIG1Q9H7V2 258 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 STOX2Q9P2F5 926 aaPredicted RBP16.58■□□□□ 0.24
LIG1-204ENST00000542460 EPHA6Q9UF33 1036 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 GRID1Q9ULK0 1009 aa16.58■□□□□ 0.24
LIG1-204ENST00000542460 PIPSLA2A3N6 862 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 C2orf74A8MZ97 194 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 E7ENX8 843 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 CASC3O15234 703 aaKnown RBP16.57■□□□□ 0.24
LIG1-204ENST00000542460 TAP2Q03519 686 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 CFHR1Q03591 330 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 KIR2DS3Q14952 304 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 AGTRAPQ6RW13 159 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 BANPQ8N9N5 519 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 SMPDL3AQ92484 453 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 SLC22A18Q96BI1 424 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 FBXL8Q96CD0 374 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 ZDHHC12Q96GR4 267 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 TWSG1Q9GZX9 223 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 ZMYND15Q9H091 742 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 MRPL46Q9H2W6 279 aaKnown RBP16.57■□□□□ 0.24
LIG1-204ENST00000542460 TMBIM4Q9HC24 238 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 MKS1Q9NXB0 559 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 CD274Q9NZQ7 290 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 TMEM216Q9P0N5 145 aa16.57■□□□□ 0.24
LIG1-204ENST00000542460 ATXN7L1Q9ULK2 861 aaPredicted RBP16.57■□□□□ 0.24
LIG1-204ENST00000542460 GSAPA4D1B5 854 aa16.56■□□□□ 0.24
LIG1-204ENST00000542460 NCF1BA6NI72 391 aaPredicted RBP16.56■□□□□ 0.24
LIG1-204ENST00000542460 NCF1CA8MVU1 366 aaPredicted RBP16.56■□□□□ 0.24
LIG1-204ENST00000542460 CAPN5O15484 640 aaPredicted RBP16.56■□□□□ 0.24
LIG1-204ENST00000542460 S100BP04271 92 aaPredicted RBP16.56■□□□□ 0.24
LIG1-204ENST00000542460 NCF1P14598 390 aaPredicted RBP16.56■□□□□ 0.24
LIG1-204ENST00000542460 FASTKQ14296 549 aaKnown RBP16.56■□□□□ 0.24
LIG1-204ENST00000542460 TMEM71Q6P5X7 295 aa16.56■□□□□ 0.24
LIG1-204ENST00000542460 EXOC3L1Q86VI1 746 aa16.56■□□□□ 0.24
LIG1-204ENST00000542460 LRRC56Q8IYG6 542 aaPredicted RBP16.56■□□□□ 0.24
LIG1-204ENST00000542460 TCAIMQ8N3R3 496 aa16.56■□□□□ 0.24
LIG1-204ENST00000542460 C2orf73Q8N5S3 287 aaPredicted RBP16.56■□□□□ 0.24
LIG1-204ENST00000542460 LMNTD1Q8N9Z9 388 aa16.56■□□□□ 0.24
LIG1-204ENST00000542460 EXT2Q93063 718 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms