RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 ECT2LQ008S8 904 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC10A7Q0GE19 358 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 MERTKQ12866 999 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SERINC3Q13530 473 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 TRIM25Q14258 630 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PRPSAP1Q14558 356 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ZNF846Q147U1 533 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ATAD3BQ5T9A4 648 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 NAPRTQ6XQN6 538 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 LINC00523Q86TU6 105 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ZSWIM9Q86XI8 627 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ZNF354CQ86Y25 554 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 DNAAF3Q8N9W5 541 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 AKAP1Q92667 903 aaKnown RBP eCLIP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 WBP2Q969T9 261 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PSMG2Q969U7 264 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ZNF669Q96BR6 464 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SH3YL1Q96HL8 342 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 FICDQ9BVA6 458 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 CXXC1Q9P0U4 656 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 FIS1Q9Y3D6 152 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PIAS3Q9Y6X2 628 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 DBX1A6NMT0 343 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 TOR1AO14656 332 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PHGDHO43175 533 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 JRKO75564 520 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ARNTP27540 789 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ACVRL1P37023 503 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SGSHP51688 502 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 GEMP55040 296 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 NME5P56597 212 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PARP15Q460N3 678 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 FBXO48Q5FWF7 155 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PITRM1Q5JRX3 1037 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 AGAP7PQ5VUJ5 663 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 GK5Q6ZS86 529 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 C16orf59Q7L2K0 433 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 CMC1Q7Z7K0 106 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC22A16Q86VW1 577 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 C7orf61Q8IZ16 206 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PGBD3Q8N328 593 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SNX31Q8N9S9 440 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ARRDC2Q8TBH0 407 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 AUTS2Q8WXX7 1259 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 RAD51AP1Q96B01 352 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SLCO4A1Q96BD0 722 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 PHF21AQ96BD5 680 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 FEM1CQ96JP0 617 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 KLHL5Q96PQ7 755 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ZNF347Q96SE7 839 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 AGAP2Q99490 1192 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 CPNE1Q99829 537 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 TDRD1Q9BXT4 1180 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 ZCCHC2Q9C0B9 1178 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC25A51Q9H1U9 297 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 TMEM245Q9H330 911 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 HMG20AQ9NP66 347 aa7.83□□□□□ -1.16
PDLIM5-221ENST00000542407 HEATR9A2RTY3 570 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 C2orf78A6NCI8 922 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 H0YJX3 145 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 PDPK1O15530 556 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 STC2O76061 302 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 ACRP10323 421 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 HOXB3P14651 431 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 MAGP20916 626 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 GLDCP23378 1020 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 HOXD9P28356 352 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 ARCN1P48444 511 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 MAN2A2P49641 1150 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 IFITM3Q01628 133 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 RHDQ02161 417 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 IL10RBQ08334 325 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 HECTD3Q5T447 861 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 CACHD1Q5VU97 1274 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 CYP20A1Q6UW02 462 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 TCEAL8Q8IYN2 117 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 ZCCHC7Q8N3Z6 543 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 FBXO30Q8TB52 745 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 CANT1Q8WVQ1 401 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 PLD4Q96BZ4 506 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 ASB9Q96DX5 294 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 PPP1R2P1Q96PQ5 205 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 DOK1Q99704 481 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 RBBP8Q99708 897 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 BCL7BQ9BQE9 202 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 KLF16Q9BXK1 252 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 DGCR6LQ9BY27 220 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 TINAGL1Q9GZM7 467 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 OR51B5Q9H339 312 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 TRIT1Q9H3H1 467 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 ZC4H2Q9NQZ6 224 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 SPG21Q9NZD8 308 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 DCDC2Q9UHG0 476 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 PSME2Q9UL46 239 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 PRAMEF11O60813 436 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 RAMP2O60895 175 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 SNAPINO95295 136 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 PRKAR1AP10644 381 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 HDCP19113 662 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms