RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 ZNF23P17027 643 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 POLR2CP19387 275 aaPredicted RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 TYMPP19971 482 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 UBA1P22314 1058 aaKnown RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 SP100P23497 879 aaPredicted RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 PON1P27169 355 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 TMOD1P28289 359 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 HOXA13P31271 388 aaPredicted RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 MATR3P43243 847 aaKnown RBP eCLIP3.35□□□□□ -1.878e-8■■■□□ 16
LEMD3-204ENST00000542032 ARCN1P48444 511 aaKnown RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 HNMTP50135 292 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 LUMP51884 338 aaPredicted RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 ARFIP1P53367 373 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 ATP12AP54707 1039 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 ITGA7Q13683 1181 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 MEP1BQ16820 701 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 HFEQ30201 348 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 ZSCAN23Q3MJ62 389 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 KRT71Q3SY84 523 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 CDONQ4KMG0 1287 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 TMEM35AQ53FP2 167 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 RAB6CQ53S08 254 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 CCDC183Q5T5S1 534 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 OR7E24Q6IFN5 339 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 FAM171BQ6P995 826 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 PAPD4Q6PIY7 484 aaKnown RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 FIP1L1Q6UN15 594 aaKnown RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 RABEPKQ7Z6M1 372 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 ADCK1Q86TW2 530 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 DENND6BQ8NEG7 585 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 TRIM58Q8NG06 486 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 OR52K2Q8NGK3 314 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 GRAPLQ8TC17 118 aaPredicted RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 PTPMT1Q8WUK0 201 aaPredicted RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 SLC38A5Q8WUX1 472 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 TEKT4Q8WW24 435 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 GIMAP1Q8WWP7 306 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 RRNAD1Q96FB5 475 aaKnown RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 ST6GAL2Q96JF0 529 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 TMEM68Q96MH6 324 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 NEK1Q96PY6 1258 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 INTS14Q96SY0 518 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 KIFC3Q9BVG8 833 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 RAB6CQ9H0N0 254 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 NT5C3AQ9H0P0 336 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 MAGIXQ9H6Y5 334 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 DNAJC18Q9H819 358 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 IL1RAPL2Q9NP60 686 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 MBNL1Q9NR56 388 aaKnown RBP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 ABCB8Q9NUT2 735 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 OLAHQ9NV23 265 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 AATFQ9NY61 560 aaKnown RBP eCLIP3.35□□□□□ -1.87
LEMD3-204ENST00000542032 HAO2Q9NYQ3 351 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 NINJ2Q9NZG7 142 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 DLGAP2Q9P1A6 1054 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 AMACRQ9UHK6 382 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 FBXL2Q9UKC9 423 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 LIPT1Q9Y234 373 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 C2CD2Q9Y426 696 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 LIPGQ9Y5X9 500 aa3.35□□□□□ -1.87
LEMD3-204ENST00000542032 GREB1LQ9C091 1923 aaPredicted RBP3.34□□□□□ -1.87
LEMD3-204ENST00000542032 GPR75-ASB3A0A0A6YYF3 556 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 TCRBV21S2A2A0A5A6 115 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 ENO4A6NNW6 628 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 H0YC42 278 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 AP3B1O00203 1094 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 CASQ2O14958 399 aaPredicted RBP3.34□□□□□ -1.87
LEMD3-204ENST00000542032 ANKRD28O15084 1053 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 KIAA0754O94854 1291 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 BCL10O95999 233 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 LDLRP01130 860 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 OPN1MWP04001 364 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 PRSS1P07477 247 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 INHBAP08476 426 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 PATE4P0C8F1 98 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 OPN1MW2P0DN77 364 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 OPN1MW3P0DN78 364 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 PTPN3P26045 913 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 AHRP35869 848 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 TRPC1P48995 793 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 CAMLGP49069 296 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 SREBF2Q12772 1141 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 RALGDSQ12967 914 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 SGCGQ13326 291 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 PPIGQ13427 754 aaKnown RBP eCLIP3.34□□□□□ -1.87
LEMD3-204ENST00000542032 MYLK3Q32MK0 819 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 SLC39A12Q504Y0 691 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 HSP90B2PQ58FF3 399 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 LRIF1Q5T3J3 769 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 C6orf163Q5TEZ5 329 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 CST9LP1Q5W188 147 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 KRT79Q5XKE5 535 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 SLC35E4Q6ICL7 350 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 RAD9BQ6WBX8 426 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 LINC00696Q6ZRV3 163 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 Q75L30 129 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 ERN2Q76MJ5 926 aaKnown RBP3.34□□□□□ -1.87
LEMD3-204ENST00000542032 KRTAP7-1Q8IUC3 87 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 CNTN4Q8IWV2 1026 aa3.34□□□□□ -1.87
LEMD3-204ENST00000542032 IQCF2Q8IXL9 164 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms