RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.09□□□□□ -1.59
SNHG1-218ENST00000541615 CYP24A1Q07973 514 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 ILKQ13418 452 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 PICALMQ13492 652 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 DGKZQ13574 1117 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 GRM7Q14831 915 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 QPRTQ15274 297 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 TARBP2Q15633 366 aaKnown RBP5.09□□□□□ -1.59
SNHG1-218ENST00000541615 CALCRLQ16602 461 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 CTF1Q16619 201 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 HKDC1Q2TB90 917 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 CHRFAM7AQ494W8 412 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 PTPN20Q4JDL3 420 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 USP39Q53GS9 565 aaKnown RBP5.09□□□□□ -1.59
SNHG1-218ENST00000541615 PIGGQ5H8A4 983 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 OR2B11Q5JQS5 317 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 RALGPS1Q5JS13 557 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 MIIPQ5JXC2 388 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 SLC35F1Q5T1Q4 408 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 ARHGAP40Q5TG30 622 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 TTC23Q5W5X9 447 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 OR5M10Q6IEU7 315 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 CDC73Q6P1J9 531 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 KCNT2Q6UVM3 1135 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 PTCHD4Q6ZW05 846 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 P4HA3Q7Z4N8 544 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 BTLAQ7Z6A9 289 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 PLEKHH3Q7Z736 793 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 FAM35AQ86V20 835 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 TMEM17Q86X19 198 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 FAM131BQ86XD5 332 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 ARID3BQ8IVW6 561 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-218ENST00000541615 SMYD4Q8IYR2 804 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-218ENST00000541615 RDH10Q8IZV5 341 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 GHDCQ8N2G8 530 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 ZNF276Q8N554 614 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 FAM46DQ8NEK8 389 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 OR9A1PQ8NGU1 263 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 RASGRP4Q8TDF6 673 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 GLYATL2Q8WU03 294 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 PPP1R13LQ8WUF5 828 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 NR4A3Q92570 626 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 FCGR1BQ92637 280 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 RORBQ92753 470 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 CORO2AQ92828 525 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 ELMO3Q96BJ8 720 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 HMCESQ96FZ2 354 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 SLC45A3Q96JT2 553 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 FAM84BQ96KN1 310 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-218ENST00000541615 DMRTB1Q96MA1 342 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 PPM1MQ96MI6 270 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 ASB16Q96NS5 453 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 WFIKKN1Q96NZ8 548 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 SORCS2Q96PQ0 1159 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 NODALQ96S42 347 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 ZBTB18Q99592 522 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 CDCA3Q99618 268 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-218ENST00000541615 IL12RB2Q99665 862 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 TREX2Q9BQ50 279 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-218ENST00000541615 APOL2Q9BQE5 337 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 ZSWIM1Q9BR11 485 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 NAT9Q9BTE0 207 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 BBS2Q9BXC9 721 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 LRRC2Q9BYS8 371 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 GPR62Q9BZJ7 368 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 DERL2Q9GZP9 239 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 NXF2Q9GZY0 626 aaKnown RBP5.09□□□□□ -1.59
SNHG1-218ENST00000541615 ING2Q9H160 280 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 IKZF4Q9H2S9 585 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 MUC13Q9H3R2 512 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 PDZD7Q9H5P4 517 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 ESRP2Q9H6T0 727 aaKnown RBP5.09□□□□□ -1.59
SNHG1-218ENST00000541615 FOLH1BQ9HBA9 442 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 C3orf14Q9HBI5 128 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 SPAG4Q9NPE6 437 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 C11orf16Q9NQ32 467 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 FAM120CQ9NX05 1096 aaKnown RBP5.09□□□□□ -1.59
SNHG1-218ENST00000541615 GFOD1Q9NXC2 390 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 COL20A1Q9P218 1284 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 ARMCX1Q9P291 453 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 EIF2B4Q9UI10 523 aaKnown RBP5.09□□□□□ -1.59
SNHG1-218ENST00000541615 CPA4Q9UI42 421 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 NAGPAQ9UK23 515 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 PCDHGB5Q9Y5G0 923 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 LYVE1Q9Y5Y7 322 aa5.09□□□□□ -1.59
SNHG1-218ENST00000541615 TSPOAP1O95153 1857 aa5.09□□□□□ -1.6
SNHG1-218ENST00000541615 PIK3C2AO00443 1686 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 NEXMIFQ5QGS0 1516 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 CRB1P82279 1406 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 CNTNAP2Q9UHC6 1331 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 A0A0D9SFI3 127 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 TEX13CA0A0J9YWL9 993 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 KLF18A0A0U1RQI7 1052 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 A0A0U1RQV5 110 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 FAM237BA0A1B0GVD1 139 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 A0A1B0GVI7 797 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 A0A1W2PPL8 197 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 RRN3P2A6NIE6 340 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 KCNU1A8MYU2 1149 aa5.08□□□□□ -1.6
SNHG1-218ENST00000541615 TSTD3H0UI37 97 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms