RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 DPP10Q8N608 796 aa16.77■□□□□ 0.28
SPIDR-227ENST00000541342 PNPT1Q8TCS8 783 aaKnown RBP16.77■□□□□ 0.28
SPIDR-227ENST00000541342 FBXL8Q96CD0 374 aa16.77■□□□□ 0.28
SPIDR-227ENST00000541342 PPM1MQ96MI6 270 aa16.77■□□□□ 0.28
SPIDR-227ENST00000541342 HGH1Q9BTY7 390 aa16.77■□□□□ 0.28
SPIDR-227ENST00000541342 LHPPQ9H008 270 aa16.77■□□□□ 0.28
SPIDR-227ENST00000541342 SARS2Q9NP81 518 aaKnown RBP16.77■□□□□ 0.28
SPIDR-227ENST00000541342 PRMT5O14744 637 aaPredicted RBP16.77■□□□□ 0.27
SPIDR-227ENST00000541342 ATP6V1G1O75348 118 aa16.77■□□□□ 0.27
SPIDR-227ENST00000541342 OR4F21O95013 312 aa16.77■□□□□ 0.27
SPIDR-227ENST00000541342 POLR2EP19388 210 aaKnown RBP16.77■□□□□ 0.27
SPIDR-227ENST00000541342 C21orf59P57076 290 aa16.77■□□□□ 0.27
SPIDR-227ENST00000541342 NKG7Q16617 165 aa16.77■□□□□ 0.27
SPIDR-227ENST00000541342 GTF2IRD2BQ6EKJ0 949 aa16.77■□□□□ 0.27
SPIDR-227ENST00000541342 CERS6Q6ZMG9 384 aa16.77■□□□□ 0.27
SPIDR-227ENST00000541342 GTF2IRD2Q86UP8 949 aa16.77■□□□□ 0.27
SPIDR-227ENST00000541342 NKAPQ8N5F7 415 aaKnown RBP16.77■□□□□ 0.27
SPIDR-227ENST00000541342 ZNF557Q8N988 423 aaPredicted RBP16.77■□□□□ 0.27
SPIDR-227ENST00000541342 ZNF641Q96N77 438 aaPredicted RBP16.77■□□□□ 0.27
SPIDR-227ENST00000541342 SAMD11Q96NU1 681 aa16.77■□□□□ 0.27
SPIDR-227ENST00000541342 HBEGFQ99075 208 aa16.77■□□□□ 0.27
SPIDR-227ENST00000541342 MTG2Q9H4K7 406 aa16.77■□□□□ 0.27
SPIDR-227ENST00000541342 SH3GLB1Q9Y371 365 aa16.77■□□□□ 0.27
SPIDR-227ENST00000541342 COMMD10Q9Y6G5 202 aa16.77■□□□□ 0.27
SPIDR-227ENST00000541342 E5RI56 91 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 SYNCRIPO60506 623 aaKnown RBP16.76■□□□□ 0.27
SPIDR-227ENST00000541342 ALBP02768 609 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 FUCA1P04066 466 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 CISD3P0C7P0 127 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 ACRV1P26436 265 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 SPAM1P38567 509 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 MESP2Q0VG99 397 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 RBBP7Q16576 425 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 MOGQ16653 247 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 LETMD1Q6P1Q0 360 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 SFRP1Q8N474 314 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 CDYL2Q8N8U2 506 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 FNDC5Q8NAU1 212 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 LKAAEAR1Q8TD35 194 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 LINGO1Q96FE5 620 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 PIKFYVEQ9Y2I7 2098 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 WASH3PC4AMC7 463 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 IL7RP16871 459 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 CRHBPP24387 322 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 HTR6P50406 440 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 IST1P53990 364 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 TMBIM6P55061 237 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 ERVPABLB-1P60509 514 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 DUSP6Q16828 381 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 HABP4Q5JVS0 413 aaKnown RBP16.76■□□□□ 0.27
SPIDR-227ENST00000541342 USP45Q70EL2 814 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 CBARPQ8N350 705 aaPredicted RBP16.76■□□□□ 0.27
SPIDR-227ENST00000541342 SLC15A4Q8N697 577 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 CLDN19Q8N6F1 224 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 BPIFB6Q8NFQ5 453 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 COX4I2Q96KJ9 171 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 NSMCE2Q96MF7 247 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 SLC9A3R1O14745 358 aaPredicted RBP16.76■□□□□ 0.27
SPIDR-227ENST00000541342 ANKRD28O15084 1053 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 CCNA2P20248 432 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 DAG1Q14118 895 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 FAM78AQ5JUQ0 283 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 ANKRD34AQ69YU3 496 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 GRAMD4Q6IC98 578 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 GDPD4Q6W3E5 623 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 ZFYVE19Q96K21 471 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 BRD9Q9H8M2 597 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 UTS2RQ9UKP6 389 aa16.76■□□□□ 0.27
SPIDR-227ENST00000541342 CBFA2T3O75081 653 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 MLYCDO95822 493 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 ADH5P11766 374 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 ITGALP20701 1170 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 IL2P60568 153 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 KCNC3Q14003 757 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 GPRIN3Q6ZVF9 776 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 R3HCC1LQ7Z5L2 792 aaKnown RBP16.75■□□□□ 0.27
SPIDR-227ENST00000541342 NPAS3Q8IXF0 933 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 HTATIP2Q9BUP3 242 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 PCDHB1Q9Y5F3 818 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 SYCE1LA8MT33 242 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 K7EPI3 171 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 PAPLNO95428 1278 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 NPPAP01160 153 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 C1SP09871 688 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 RPS3P23396 243 aaKnown RBP eCLIP16.75■□□□□ 0.27
SPIDR-227ENST00000541342 EEF1B2P24534 225 aaKnown RBP16.75■□□□□ 0.27
SPIDR-227ENST00000541342 PIGAP37287 484 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 CCR3P51677 355 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 DGKQP52824 942 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 CENPSQ8N2Z9 138 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 CIPCQ9C0C6 399 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 CLPBQ9H078 707 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 HEBP1Q9NRV9 189 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 B4GALT6Q9UBX8 382 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 MAGEL2Q9UJ55 1249 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 DHRS7Q9Y394 339 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 CEP290O15078 2479 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 DYTNA2CJ06 578 aa16.75■□□□□ 0.27
SPIDR-227ENST00000541342 OTOL1A6NHN0 477 aaPredicted RBP16.75■□□□□ 0.27
SPIDR-227ENST00000541342 EPOPA6NHQ4 379 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms