RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 RAPSNQ13702 412 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 INO80DQ53TQ3 878 aaPredicted RBP9.31□□□□□ -0.92
CNOT4-212ENST00000541284 SLC8B1Q6J4K2 584 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 SPESP1Q6UW49 350 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 CERS6Q6ZMG9 384 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 MACC1Q6ZN28 852 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 PARP8Q8N3A8 854 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 CNIH3Q8TBE1 160 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 OVCA2Q8WZ82 227 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 YIPF6Q96EC8 236 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 SH3YL1Q96HL8 342 aaPredicted RBP9.31□□□□□ -0.92
CNOT4-212ENST00000541284 TRIT1Q9H3H1 467 aaKnown RBP9.31□□□□□ -0.92
CNOT4-212ENST00000541284 LRTM1Q9HBL6 345 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 AASSQ9UDR5 926 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 ZNF490Q9ULM2 529 aaPredicted RBP9.31□□□□□ -0.92
CNOT4-212ENST00000541284 COQ6Q9Y2Z9 468 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 TMEM229AB2RXF0 380 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 NPIPB8E9PQR5 432 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 SLC28A1O00337 649 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 SMAD6O43541 496 aaKnown RBP9.31□□□□□ -0.92
CNOT4-212ENST00000541284 JRKO75564 520 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 SERPINA1P01009 418 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 ALDH2P05091 517 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 GALTP07902 379 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 EBLN1P0CF75 366 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 ELNP15502 786 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 BPIP17213 487 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 RPL17P18621 184 aaKnown RBP9.31□□□□□ -0.92
CNOT4-212ENST00000541284 NR4A1P22736 598 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 CCR3P51677 355 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 CRYBA2P53672 197 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 SP3Q02447 781 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 SMARCB1Q12824 385 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 BFSP2Q13515 415 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 FRA10AC1Q70Z53 315 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 B3GNT8Q7Z7M8 397 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 MFSD4AQ8N468 514 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 FCRL1Q96LA6 429 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 GPRC5BQ9NZH0 403 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 KLQ9UEF7 1012 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 ABCG2Q9UNQ0 655 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 LRRK1Q38SD2 2015 aa9.31□□□□□ -0.92
CNOT4-212ENST00000541284 A0A096LPI6 279 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 RGS14O43566 566 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 SLC25A14O95258 325 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 BCL10O95999 233 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 PDYNP01213 254 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 PORP16435 677 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 JUNDP17535 347 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 PRPH2P23942 346 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 EEF1B2P24534 225 aaKnown RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 MAP4P27816 1152 aaKnown RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 GKP32189 559 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 GNPDA1P46926 289 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 DAPP51397 102 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 BCAP31P51572 246 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 HNRNPFP52597 415 aaKnown RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 CAPN13Q6MZZ7 669 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 CES5AQ6NT32 575 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 METTL2BQ6P1Q9 378 aaKnown RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 ZNF783Q6ZMS7 281 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 TRIM74Q86UV6 250 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 TRIM73Q86UV7 250 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 MYO19Q96H55 970 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 CDK5RAP1Q96SZ6 601 aaKnown RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 C19orf43Q9BQ61 176 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 THUMPD3Q9BV44 507 aaKnown RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 ING2Q9H160 280 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 KCNH6Q9H252 994 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 ADNPQ9H2P0 1102 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 DUSP21Q9H596 190 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 PCDHGA10Q9Y5H3 936 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 XPNPEP2O43895 674 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 SCN2BO60939 215 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 AKT1P31749 480 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 CLDN8P56748 225 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 CD300CQ08708 224 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 ADPRMQ3LIE5 342 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 LDLRAP1Q5SW96 308 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 HECTD3Q5T447 861 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 SHQ1Q6PI26 577 aaKnown RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 SNX20Q7Z614 316 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 FAM217AQ8IXS0 508 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 FBXO22Q8NEZ5 403 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 REXO5Q96IC2 774 aaKnown RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 SLC22A12Q96S37 553 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 FAM126AQ9BYI3 521 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 DPY30Q9C005 99 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 ARMC7Q9H6L4 198 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 C1orf109Q9NX04 203 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 EIF3LQ9Y262 564 aaKnown RBP9.3□□□□□ -0.92
CNOT4-212ENST00000541284 SH3GLB1Q9Y371 365 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 PKP3Q9Y446 797 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 TMEM221A6NGB7 291 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 TRBC1P01850 177 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 CCDC159P0C7I6 412 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 SDC1P18827 310 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 EPHA2P29317 976 aa9.3□□□□□ -0.92
CNOT4-212ENST00000541284 WNT3P56703 355 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms