RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SLC5A12Q1EHB4 618 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 TMTC4Q5T4D3 741 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 CYB5D1Q6P9G0 228 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 CDHR3Q6ZTQ4 885 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 TAX1BP1Q86VP1 789 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 BPHLQ86WA6 291 aaPredicted RBP16.31■□□□□ 0.2
CD9-209ENST00000540891 C19orf47Q8N9M1 422 aaKnown RBP16.31■□□□□ 0.2
CD9-209ENST00000540891 GABPB2Q8TAK5 448 aaPredicted RBP16.31■□□□□ 0.2
CD9-209ENST00000540891 HMGCLL1Q8TB92 370 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 FBXO25Q8TCJ0 367 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 FOPNLQ96NB1 174 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 LRRC1Q9BTT6 524 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 TUBB2BQ9BVA1 445 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 SLC39A10Q9ULF5 831 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 PSAT1Q9Y617 370 aa16.31■□□□□ 0.2
CD9-209ENST00000540891 A0A0J9YY10 115 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 LOC101059948A0A1B0GTJ6 334 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 MYO1CO00159 1063 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 EIF3HO15372 352 aaKnown RBP eCLIP16.3■□□□□ 0.2
CD9-209ENST00000540891 HCRTR1O43613 425 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 VPS26AO75436 327 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 MSL3P1P0C860 447 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 MPC1LP0DKB6 136 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 ERGP11308 486 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 ENO3P13929 434 aaPredicted RBP16.3■□□□□ 0.2
CD9-209ENST00000540891 LIFP15018 202 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 MAP4P27816 1152 aaKnown RBP16.3■□□□□ 0.2
CD9-209ENST00000540891 GABRA4P48169 554 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 PGGT1BP53609 377 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 PLTPP55058 493 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 PRAMEF17Q5VTA0 474 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 C8orf74Q6P047 294 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 TTC23LQ6PF05 361 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 PIWIL4Q7Z3Z4 852 aaKnown RBP16.3■□□□□ 0.2
CD9-209ENST00000540891 IL22RA1Q8N6P7 574 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 GALNT6Q8NCL4 622 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 FCRL4Q96PJ5 515 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 RAB11FIP5Q9BXF6 653 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 SAYSD1Q9NPB0 183 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 SMYD2Q9NRG4 433 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 LOC400499M0QZD8 3231 aa16.3■□□□□ 0.2
CD9-209ENST00000540891 A0A1W2PPV9 198 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 ESYT3A0FGR9 886 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 GFYI3L273 518 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 TUBB4AP04350 444 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 CBSLP0DN79 551 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 MCM3P25205 808 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 SSTR1P30872 391 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 CBSP35520 551 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 FASTKQ14296 549 aaKnown RBP16.29■□□□□ 0.2
CD9-209ENST00000540891 CYP2A13Q16696 494 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 KIAA1614Q5VZ46 1190 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 CAPN12Q6ZSI9 719 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 ESX1Q8N693 406 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 NOA1Q8NC60 698 aaKnown RBP16.29■□□□□ 0.2
CD9-209ENST00000540891 OR9A1PQ8NGU1 263 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 OR1L3Q8NH93 324 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 MAGEC3Q8TD91 643 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 PYROXD1Q8WU10 500 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 ASB11Q8WXH4 323 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 SEC14L1Q92503 715 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 PKP4Q99569 1192 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 PHACTR1Q9C0D0 580 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 CHRNA10Q9GZZ6 450 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 TAS2R13Q9NYV9 303 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 SPATA7Q9P0W8 599 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 ZFATQ9P243 1243 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 LNPEPQ9UIQ6 1025 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 TRMT6Q9UJA5 497 aaKnown RBP16.29■□□□□ 0.2
CD9-209ENST00000540891 KLHL20Q9Y2M5 609 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 PCDHGA4Q9Y5G9 962 aa16.29■□□□□ 0.2
CD9-209ENST00000540891 H3BMH7 237 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 KIF2AO00139 706 aaPredicted RBP16.28■□□□□ 0.2
CD9-209ENST00000540891 EIF3FO00303 357 aaPredicted RBP16.28■□□□□ 0.2
CD9-209ENST00000540891 TERTO14746 1132 aaKnown RBP16.28■□□□□ 0.2
CD9-209ENST00000540891 PIAS1O75925 651 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 C1QAP02745 245 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 NTRK1P04629 796 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 MAGP20916 626 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 STAT5AP42229 794 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 CAV1Q03135 178 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 ABHD18Q0P651 414 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 HECTD2Q5U5R9 776 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 UGT3A1Q6NUS8 523 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 PAQR3Q6TCH7 311 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 C6orf15Q6UXA7 325 aaPredicted RBP16.28■□□□□ 0.2
CD9-209ENST00000540891 MMGT1Q8N4V1 131 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 SLC38A9Q8NBW4 561 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 FBXO15Q8NCQ5 510 aaPredicted RBP16.28■□□□□ 0.2
CD9-209ENST00000540891 OR8K5Q8NH50 307 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 DLG3Q92796 817 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 SLC22A18Q96BI1 424 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 TRIM44Q96DX7 344 aaPredicted RBP16.28■□□□□ 0.2
CD9-209ENST00000540891 TCTN2Q96GX1 697 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 OLFM1Q99784 485 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 MCMBPQ9BTE3 642 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 AKIRIN1Q9H9L7 192 aaPredicted RBP16.28■□□□□ 0.2
CD9-209ENST00000540891 SYTL2Q9HCH5 934 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 ZDHHC18Q9NUE0 388 aa16.28■□□□□ 0.2
CD9-209ENST00000540891 NBEAQ8NFP9 2946 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms