RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ST6GALNAC3Q8NDV1 305 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 UBE2Q2Q8WVN8 375 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 VPS50Q96JG6 964 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 RANBP9Q96S59 729 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 WDR77Q9BQA1 342 aaPredicted RBP11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 MENTQ9BUN1 341 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 TSSK1BQ9BXA7 367 aa11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 MRM3Q9HC36 420 aaKnown RBP11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 INTS7Q9NVH2 962 aaKnown RBP11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 NXT1Q9UKK6 140 aaKnown RBP11.54□□□□□ -0.56
CBX3P4-202ENST00000540428 HEATR9A2RTY3 570 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 CCDC162PA2VCL2 907 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 OR51F1A6NGY5 319 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 DSCR3O14972 297 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 GPC4O75487 556 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 GAS8O95995 478 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 PTMAP06454 111 aaKnown RBP11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 CD9P21926 228 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 ALAS2P22557 587 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 ITGA3P26006 1051 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 CCR7P32248 378 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 TSFMP43897 325 aaKnown RBP11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 GDF10P55107 478 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 CDH17Q12864 832 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 KLF1Q13351 362 aaPredicted RBP11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 ZC3H12BQ5HYM0 836 aaKnown RBP11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 TCTE1Q5JU00 501 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 IRAK1BP1Q5VVH5 260 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 ZNF787Q6DD87 383 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 UNC5DQ6UXZ4 953 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 TTLL10Q6ZVT0 673 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 MCATQ8IVS2 390 aaKnown RBP11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 DCUN1D3Q8IWE4 304 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 UBL4BQ8N7F7 174 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 OR13J1Q8NGT2 312 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 SLC35B2Q8TB61 432 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 ASZ1Q8WWH4 475 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 PEX13Q92968 403 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 ZNF285Q96NJ3 590 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 PANX2Q96RD6 677 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 SPSB2Q99619 263 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 ZBTB20Q9HC78 741 aaPredicted RBP11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 SLC6A20Q9NP91 592 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 IL1RAPL1Q9NZN1 696 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 FBXL4Q9UKA2 621 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 PLAGL1Q9UM63 463 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 DUSP10Q9Y6W6 482 aa11.53□□□□□ -0.56
CBX3P4-202ENST00000540428 UTP20O75691 2785 aaKnown RBP11.52□□□□□ -0.56
CBX3P4-202ENST00000540428 PIKFYVEQ9Y2I7 2098 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 GRID2IPA4D2P6 1211 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 MIF4GDA9UHW6 222 aaKnown RBP11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 MASP2O00187 686 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 SOCS6O14544 535 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 OR1I1O60431 355 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 GOT2P00505 430 aaKnown RBP11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 ITGAXP20702 1163 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 COL8A1P27658 744 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 STIP1P31948 543 aaKnown RBP11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 PPARGP37231 505 aaPredicted RBP11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 FOXL2P58012 376 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 ACVR1Q04771 509 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 HSPA14Q0VDF9 509 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 GRB7Q14451 532 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 GRM7Q14831 915 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 NKG7Q16617 165 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 TSTD2Q5T7W7 516 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 AGAP7PQ5VUJ5 663 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 B3GNTL1Q67FW5 361 aaPredicted RBP11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 NAPRTQ6XQN6 538 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 TICAM1Q8IUC6 712 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 SYCE1Q8N0S2 351 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 DNAAF3Q8N9W5 541 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 LINC01555Q8NAE3 123 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 OR52K1Q8NGK4 314 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 OR2L8Q8NGY9 312 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 HDAC10Q969S8 669 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 MRFAP1L1Q96HT8 127 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 AGAP4Q96P64 663 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 TMEM121Q9BTD3 319 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 CARD6Q9BX69 1037 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 RAB11FIP5Q9BXF6 653 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 LACRTQ9GZZ8 138 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 SEMA3GQ9NS98 782 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 CUTCQ9NTM9 273 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 PIH1D1Q9NWS0 290 aaKnown RBP11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 IMPACTQ9P2X3 320 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 CDC23Q9UJX2 597 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 AMFRQ9UKV5 643 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 NOVA2Q9UNW9 492 aaKnown RBP11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 NTNG1Q9Y2I2 539 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 HS3ST3B1Q9Y662 390 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 MYO9AB2RTY4 2548 aa11.52□□□□□ -0.57
CBX3P4-202ENST00000540428 FER1L5A0AVI2 2057 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 FITM1A5D6W6 292 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 SOWAHDA6NJG2 315 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 VSTM2BA6NLU5 285 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 TARM1B6A8C7 271 aa11.51□□□□□ -0.57
CBX3P4-202ENST00000540428 RASGRF2O14827 1237 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms