RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 LATS1O95835 1130 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 SLC6A4P31645 630 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 MAP3K8P41279 467 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 HSPA7P48741 367 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 LIX1Q8N485 282 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 ZSCAN4Q8NAM6 433 aaPredicted RBP12.59□□□□□ -0.39
CACNB4-210ENST00000539935 OR10A4Q9H209 315 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 ZNF282Q9UDV7 671 aaPredicted RBP12.59□□□□□ -0.39
CACNB4-210ENST00000539935 ZNF705EA8MWA4 302 aaPredicted RBP12.59□□□□□ -0.39
CACNB4-210ENST00000539935 AURKAO14965 403 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 AP2A1O95782 977 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 CORO1AP31146 461 aaKnown RBP12.59□□□□□ -0.39
CACNB4-210ENST00000539935 SLC20A2Q08357 652 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 ARL13AQ5H913 290 aaPredicted RBP12.59□□□□□ -0.39
CACNB4-210ENST00000539935 RNF220Q5VTB9 566 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 ZDHHC21Q8IVQ6 265 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 GSKIPQ9P0R6 139 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 PCDHGB1Q9Y5G3 927 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 SEPT4O43236 478 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 GADD45GO95257 159 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 PRPS2P11908 318 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 CCKBRP32239 447 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 PMEPA1Q969W9 287 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 KCNJ13O60928 360 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 POU2F1P14859 743 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 CD52P31358 61 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 GBX2P52951 348 aaPredicted RBP12.59□□□□□ -0.39
CACNB4-210ENST00000539935 LIN52Q52LA3 116 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 KAT8Q9H7Z6 458 aaKnown RBP12.59□□□□□ -0.39
CACNB4-210ENST00000539935 BRF2Q9HAW0 419 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 FARSBQ9NSD9 589 aaKnown RBP12.59□□□□□ -0.39
CACNB4-210ENST00000539935 HEBP2Q9Y5Z4 205 aa12.59□□□□□ -0.39
CACNB4-210ENST00000539935 DAPL1A0PJW8 107 aa12.58□□□□□ -0.39
CACNB4-210ENST00000539935 E9PAM4 449 aa12.58□□□□□ -0.39
CACNB4-210ENST00000539935 AVPR1BP47901 424 aa12.58□□□□□ -0.39
CACNB4-210ENST00000539935 PAMR1Q6UXH9 720 aa12.58□□□□□ -0.39
CACNB4-210ENST00000539935 ARHGAP12Q8IWW6 846 aa12.58□□□□□ -0.39
CACNB4-210ENST00000539935 SPPL2BQ8TCT7 592 aa12.58□□□□□ -0.39
CACNB4-210ENST00000539935 CSPG4P5Q96PW8 444 aa12.58□□□□□ -0.39
CACNB4-210ENST00000539935 UCK2Q9BZX2 261 aa12.58□□□□□ -0.39
CACNB4-210ENST00000539935 HIPK3Q9H422 1215 aa12.58□□□□□ -0.39
CACNB4-210ENST00000539935 LYARQ9NX58 379 aaKnown RBP12.58□□□□□ -0.39
CACNB4-210ENST00000539935 CSTBP04080 98 aaKnown RBP12.58□□□□□ -0.4
CACNB4-210ENST00000539935 C8GP07360 202 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 RYKP34925 604 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 TARDBPQ13148 414 aaKnown RBP eCLIP12.58□□□□□ -0.4
CACNB4-210ENST00000539935 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
CACNB4-210ENST00000539935 OR14C36Q8NHC7 312 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 LCN9Q8WX39 176 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 FEM1AQ9BSK4 669 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 ZDHHC4Q9NPG8 344 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 ZNF446Q9NWS9 450 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 RTP1P59025 263 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 PLEKHG6Q3KR16 790 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 IFI44LQ53G44 452 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 CPNE9Q8IYJ1 553 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 OR5T2Q8NGG2 359 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 SMPDL3BQ92485 455 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 TAMM41Q96BW9 452 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 MKLN1Q9UL63 735 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 hCG_2039718K7EN88 272 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 PEPDP12955 493 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 CAPSQ13938 189 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 CEP97Q8IW35 865 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 NRSN1Q8IZ57 195 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 GIMAP5Q96F15 307 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 EBPLQ9BY08 206 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 SLC22A4Q9H015 551 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 B3GALT2O43825 422 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 MT-ND1P03886 318 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 VAMP1P23763 118 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 ATP5A1P25705 553 aaKnown RBP12.58□□□□□ -0.4
CACNB4-210ENST00000539935 CTHP32929 405 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 FKBP1AP62942 108 aaKnown RBP12.58□□□□□ -0.4
CACNB4-210ENST00000539935 LRRC55Q6ZSA7 311 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 RBM23Q86U06 439 aaKnown RBP12.58□□□□□ -0.4
CACNB4-210ENST00000539935 PWWP2AQ96N64 755 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 WRAP53Q9BUR4 548 aaKnown RBP12.58□□□□□ -0.4
CACNB4-210ENST00000539935 SMAD9O15198 467 aaKnown RBP12.58□□□□□ -0.4
CACNB4-210ENST00000539935 FFAR2O15552 330 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 MSI1O43347 362 aaKnown RBP12.58□□□□□ -0.4
CACNB4-210ENST00000539935 CPNE3O75131 537 aaKnown RBP12.58□□□□□ -0.4
CACNB4-210ENST00000539935 DDNO94850 711 aaPredicted RBP12.58□□□□□ -0.4
CACNB4-210ENST00000539935 NFATC1O95644 943 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 HSD11B1P28845 292 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 GRM5P41594 1212 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 PER3P56645 1201 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 NOMO1Q15155 1222 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 PTPN20Q4JDL3 420 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 IQCCQ4KMZ1 466 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 PGM2L1Q6PCE3 622 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 C12orf43Q96C57 262 aaKnown RBP12.58□□□□□ -0.4
CACNB4-210ENST00000539935 GDAP2Q9NXN4 497 aa12.58□□□□□ -0.4
CACNB4-210ENST00000539935 VGLL4Q14135 290 aa12.57□□□□□ -0.4
CACNB4-210ENST00000539935 ELOAQ14241 798 aaKnown RBP12.57□□□□□ -0.4
CACNB4-210ENST00000539935 ZNF527Q8NB42 609 aa12.57□□□□□ -0.4
CACNB4-210ENST00000539935 GLIS3Q8NEA6 775 aa12.57□□□□□ -0.4
CACNB4-210ENST00000539935 NINJ1Q92982 152 aa12.57□□□□□ -0.4
CACNB4-210ENST00000539935 HSPA12BQ96MM6 686 aa12.57□□□□□ -0.4
CACNB4-210ENST00000539935 SLC39A1Q9NY26 324 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms