RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SAT2Q96F10 170 aaPredicted RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 MUS81Q96NY9 551 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 UHRF2Q96PU4 802 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 FEVQ99581 238 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 SF3B5Q9BWJ5 86 aaKnown RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 FTHL17Q9BXU8 183 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 MAK16Q9BXY0 300 aaKnown RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 NFKBIZQ9BYH8 718 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 HRH4Q9H3N8 390 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 PLAC1Q9HBJ0 212 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 CDH20Q9HBT6 801 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 GPR108Q9NPR9 543 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 KIF3AQ9Y496 699 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 ATG4BQ9Y4P1 393 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 GREB1LQ9C091 1923 aaPredicted RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 SETD1AO15047 1707 aaKnown RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 NACADO15069 1562 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF318Q5VUA4 2279 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 GTPBP10A4D1E9 387 aaKnown RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 CASTOR2A6NHX0 329 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 TRIM77I1YAP6 450 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 NME2P1O60361 137 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 HNRNPCL1O60812 293 aaKnown RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 RSL1D1O76021 490 aaKnown RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 ZFAND5O76080 213 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 LETM1O95202 739 aaPredicted RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 PAPSS2O95340 614 aaPredicted RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 HAPLN1P10915 354 aaPredicted RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 HRH2P25021 359 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 TNNT3P45378 269 aaPredicted RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 CAPZA2P47755 286 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 NUDT6P53370 316 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF415Q09FC8 603 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 PMPCAQ10713 525 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 STIM1Q13586 685 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 COG2Q14746 738 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 MTHFSDQ2M296 383 aaKnown RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 RABL6Q3YEC7 729 aaPredicted RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 SLC39A12Q504Y0 691 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 PARP10Q53GL7 1025 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 SUSD4Q5VX71 490 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 ALS2CLQ60I27 953 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 ARHGAP17Q68EM7 881 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 WBP2NLQ6ICG8 309 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 CES5AQ6NT32 575 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 C15orf52Q6ZUT6 534 aaKnown RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 MIER3Q7Z3K6 550 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 HAUS6Q7Z4H7 955 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 DNAJC10Q8IXB1 793 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 KLHDC8AQ8IYD2 350 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 CCDC170Q8IYT3 715 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 ADGRF4Q8IZF3 695 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 TAGAPQ8N103 731 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 CIARTQ8N365 385 aaPredicted RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 DBF4BQ8NFT6 615 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 TRIM58Q8NG06 486 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 OR2AJ1Q8NGZ0 328 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 FIBINQ8TAL6 211 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 RLN3Q8WXF3 142 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 KRT35Q92764 455 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 CORO2AQ92828 525 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 EXT2Q93063 718 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 WBP1Q96G27 269 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF48Q96MX3 618 aaPredicted RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 SPATA13Q96N96 652 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 GUCD1Q96NT3 240 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 RCHY1Q96PM5 261 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 SIN3AQ96ST3 1273 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 DDOQ99489 341 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 CMKLR1Q99788 373 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 FUT8Q9BYC5 575 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 TRIM6Q9C030 488 aaPredicted RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 MIS12Q9H081 205 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 CYSLTR2Q9NS75 346 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 RRP7BPQ9NSQ0 103 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 EXOC1Q9NV70 894 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 FAM118AQ9NWS6 357 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 C1RLQ9NZP8 487 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 KLHL9Q9P2J3 617 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 FETUBQ9UGM5 382 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 DCDC2Q9UHG0 476 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 KCNS2Q9ULS6 477 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 NAP1L2Q9ULW6 460 aaPredicted RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 PAM16Q9Y3D7 125 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 HBS1LQ9Y450 684 aaKnown RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM202A6NGA9 273 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SERINC4A6NH21 518 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SOCS2O14508 198 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SOCS6O14544 535 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CAPN9O14815 690 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CLDN3O15551 220 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 AP5Z1O43299 807 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 HSPA12AO43301 675 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 RAMP2O60895 175 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CLN5O75503 358 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PRKRAO75569 313 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 GOSR1O95249 250 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 EML2O95834 649 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 IL1AP01583 271 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 IGHV2-70P01814 119 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms