RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ANKMY2Q8IV38 441 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 DNAJC22Q8N4W6 341 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 SIDT2Q8NBJ9 832 aaKnown RBP13.24□□□□□ -0.29
CD9-208ENST00000538834 NOA1Q8NC60 698 aaKnown RBP13.24□□□□□ -0.29
CD9-208ENST00000538834 OR2A1Q8NGT9 310 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 OR8K5Q8NH50 307 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 DLG3Q92796 817 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 PDLIM5Q96HC4 596 aaKnown RBP13.24□□□□□ -0.29
CD9-208ENST00000538834 NAF1Q96HR8 494 aaKnown RBP13.24□□□□□ -0.29
CD9-208ENST00000538834 CCNL2Q96S94 520 aaPredicted RBP13.24□□□□□ -0.29
CD9-208ENST00000538834 CTRCQ99895 268 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 FAM60AQ9NP50 221 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 FGF21Q9NSA1 209 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 SPATA7Q9P0W8 599 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 DMGDHQ9UI17 866 aaKnown RBP13.24□□□□□ -0.29
CD9-208ENST00000538834 PLAGL1Q9UM63 463 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 RUVBL2Q9Y230 463 aaKnown RBP13.24□□□□□ -0.29
CD9-208ENST00000538834 TDRKHQ9Y2W6 561 aaKnown RBP13.24□□□□□ -0.29
CD9-208ENST00000538834 UTP11Q9Y3A2 253 aaKnown RBP13.24□□□□□ -0.29
CD9-208ENST00000538834 PCDHB11Q9Y5F2 797 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 ATRXP46100 2492 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 BSNQ9UPA5 3926 aa13.24□□□□□ -0.29
CD9-208ENST00000538834 FAM159BA6NKW6 160 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 HCRTR1O43613 425 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 KDM1AO60341 852 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 CDH3P22223 829 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 FDXRP22570 491 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 MAP4P27816 1152 aaKnown RBP13.23□□□□□ -0.29
CD9-208ENST00000538834 TMPRSS3P57727 454 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 ABHD18Q0P651 414 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 ARHGAP19Q14CB8 494 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 PWWP2BQ6NUJ5 590 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 ARMC6Q6NXE6 501 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 CYB5D1Q6P9G0 228 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 CDHR3Q6ZTQ4 885 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 PPP1R3BQ86XI6 285 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 ZBED8Q8IZ13 594 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 LMNTD1Q8N9Z9 388 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 OR9A1PQ8NGU1 263 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 GABPB2Q8TAK5 448 aaPredicted RBP13.23□□□□□ -0.29
CD9-208ENST00000538834 FAM136AQ96C01 138 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 CFAP36Q96G28 342 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 LRFN5Q96NI6 719 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 ZNF285Q96NJ3 590 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 IL17FQ96PD4 163 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 RAB11FIP5Q9BXF6 653 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 PCDHB3Q9Y5E6 796 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 KALRNO60229 2985 aa13.23□□□□□ -0.29
CD9-208ENST00000538834 PIEZO2Q9H5I5 2752 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 A0A0J9YY10 115 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 GSAPA4D1B5 854 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 KRT87PA6NCN2 255 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 E5RI56 91 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 RAD1O60671 282 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 PVRP15151 417 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 ECHS1P30084 290 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 SSTR1P30872 391 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 STAT5AP42229 794 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 BDKRB1P46663 353 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 PLTPP55058 493 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 SLC7A5Q01650 507 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 VAC14Q08AM6 782 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 TUBB3Q13509 450 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 TTLL9Q3SXZ7 439 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 CRTC2Q53ET0 693 aaPredicted RBP13.22□□□□□ -0.29
CD9-208ENST00000538834 ZNF385CQ66K41 422 aaPredicted RBP13.22□□□□□ -0.29
CD9-208ENST00000538834 PAQR3Q6TCH7 311 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 PCSK4Q6UW60 755 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 TMEM207Q6UWW9 146 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 NLGN4XQ8N0W4 816 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 SLC38A9Q8NBW4 561 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 NLGN4YQ8NFZ3 816 aaPredicted RBP13.22□□□□□ -0.29
CD9-208ENST00000538834 CFAP61Q8NHU2 1237 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 MAGEC3Q8TD91 643 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 PYROXD1Q8WU10 500 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 SLC22A18Q96BI1 424 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 TCTN2Q96GX1 697 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 NDNQ99608 321 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 OLFM1Q99784 485 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 SLC12A9Q9BXP2 914 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 FUT8Q9BYC5 575 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 FAM129AQ9BZQ8 928 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 ZMYND15Q9H091 742 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 CPNE5Q9HCH3 593 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 LRRC4CQ9HCJ2 640 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 PDE7BQ9NP56 450 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 TAS2R13Q9NYV9 303 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 RARRES3Q9UL19 164 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 LHX6Q9UPM6 363 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 VWA7Q9Y334 891 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 DOCK10Q96BY6 2186 aa13.22□□□□□ -0.29
CD9-208ENST00000538834 SMG1Q96Q15 3661 aaKnown RBP13.21□□□□□ -0.29
CD9-208ENST00000538834 LOC101059948A0A1B0GTJ6 334 aa13.21□□□□□ -0.29
CD9-208ENST00000538834 TCRBV9S1A1TA0A576 114 aa13.21□□□□□ -0.29
CD9-208ENST00000538834 CXorf49A8MYA2 514 aaPredicted RBP13.21□□□□□ -0.29
CD9-208ENST00000538834 TARM1B6A8C7 271 aa13.21□□□□□ -0.29
CD9-208ENST00000538834 VPS26AO75436 327 aa13.21□□□□□ -0.29
CD9-208ENST00000538834 RORAP35398 523 aa13.21□□□□□ -0.29
CD9-208ENST00000538834 PPM1FP49593 454 aaPredicted RBP13.21□□□□□ -0.29
CD9-208ENST00000538834 FOXM1Q08050 763 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms