RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 PLA2G15Q8NCC3 412 aa14.41□□□□□ -0.1
ATL3-203ENST00000538786 FOXJ1Q92949 421 aa14.41□□□□□ -0.1
ATL3-203ENST00000538786 MTFMTQ96DP5 389 aaKnown RBP14.41□□□□□ -0.1
ATL3-203ENST00000538786 COX14Q96I36 57 aa14.41□□□□□ -0.1
ATL3-203ENST00000538786 ZBTB18Q99592 522 aa14.41□□□□□ -0.1
ATL3-203ENST00000538786 INTS7Q9NVH2 962 aaKnown RBP14.41□□□□□ -0.1
ATL3-203ENST00000538786 CMTM6Q9NX76 183 aa14.41□□□□□ -0.1
ATL3-203ENST00000538786 PCDHA9Q9Y5H5 950 aa14.41□□□□□ -0.1
ATL3-203ENST00000538786 IGLON5A6NGN9 336 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 NPIPB8E9PQR5 432 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 C1orf105O95561 183 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 STAMBPO95630 424 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 SLC16A8O95907 504 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 VARSP26640 1264 aaKnown RBP14.4□□□□□ -0.1
ATL3-203ENST00000538786 KIR2DL1P43626 348 aaPredicted RBP14.4□□□□□ -0.1
ATL3-203ENST00000538786 RHDQ02161 417 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 IRF8Q02556 426 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 PCDH1Q08174 1060 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 NAE1Q13564 534 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 KIAA0040Q15053 153 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 CCSMST1Q4G0I0 132 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 FRG2Q64ET8 278 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 PNCKQ6P2M8 343 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 XKR5Q6UX68 686 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 IZUMO2Q6UXV1 221 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.4□□□□□ -0.1
ATL3-203ENST00000538786 PRR23BQ6ZRT6 265 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 DHFR2Q86XF0 187 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 TMEM126BQ8IUX1 230 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 LIX1Q8N485 282 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 GLB1L3Q8NCI6 653 aaPredicted RBP14.4□□□□□ -0.1
ATL3-203ENST00000538786 OR2L2Q8NH16 312 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 OR56A3Q8NH54 315 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 HM13Q8TCT9 377 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 TMEM125Q96AQ2 219 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 FRG2BQ96QU4 278 aa14.4□□□□□ -0.1
ATL3-203ENST00000538786 C15orf38-AP3S2A0A0A6YYH1 394 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 PRSS51A0A1B0GVH4 220 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 K7EQS6 105 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 IMPA1P29218 277 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 NEK2P51955 445 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 BNIP2Q12982 314 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 PTGR1Q14914 329 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 AGERQ15109 404 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 TRIP10Q15642 601 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 SLC44A4Q53GD3 710 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 SLC2A7Q6PXP3 512 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 CRTC3Q6UUV7 619 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 ARPINQ7Z6K5 226 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 CACUL1Q86Y37 369 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 MED8Q96G25 268 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 ECSITQ9BQ95 431 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 KLHL4Q9C0H6 718 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 DPEP2Q9H4A9 486 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 DOCK8Q8NF50 2099 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 LAMA3Q16787 3333 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 TCRBV3S1A0A5B6 114 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 MGAT4DA6NG13 374 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 PEX1O43933 1283 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 PCDH8O95206 1070 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 PCSK2P16519 638 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 TIE1P35590 1138 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 CASP2P42575 452 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 GTF2A1P52655 376 aaPredicted RBP14.39□□□□□ -0.11
ATL3-203ENST00000538786 WSCD2Q2TBF2 565 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 USP39Q53GS9 565 aaKnown RBP14.39□□□□□ -0.11
ATL3-203ENST00000538786 C2orf27AQ580R0 203 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 XKR6Q5GH73 641 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 ZNF776Q68DI1 518 aaPredicted RBP14.39□□□□□ -0.11
ATL3-203ENST00000538786 C11orf96Q7Z7L8 435 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 HEATR4Q86WZ0 1026 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 KIAA2013Q8IYS2 634 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 HDDC3Q8N4P3 179 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 DNAJB14Q8TBM8 379 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 CSGALNACT1Q8TDX6 532 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 EZH1Q92800 747 aaPredicted RBP14.39□□□□□ -0.11
ATL3-203ENST00000538786 ZUFSPQ96AP4 578 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 CMTM7Q96FZ5 175 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 DUS3LQ96G46 650 aaKnown RBP14.39□□□□□ -0.11
ATL3-203ENST00000538786 OR4K3Q96R72 315 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 DPY30Q9C005 99 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 SLAMF8Q9P0V8 285 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 LRCH1Q9Y2L9 728 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 TMEM98Q9Y2Y6 226 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 DENND4AQ7Z401 1863 aa14.39□□□□□ -0.11
ATL3-203ENST00000538786 E7EQ34 232 aa14.38□□□□□ -0.11
ATL3-203ENST00000538786 DNAJA2O60884 412 aa14.38□□□□□ -0.11
ATL3-203ENST00000538786 PCCBP05166 539 aa14.38□□□□□ -0.11
ATL3-203ENST00000538786 BCKDHAP12694 445 aa14.38□□□□□ -0.11
ATL3-203ENST00000538786 ACPPP15309 386 aa14.38□□□□□ -0.11
ATL3-203ENST00000538786 CD22P20273 847 aa14.38□□□□□ -0.11
ATL3-203ENST00000538786 PEX2P28328 305 aa14.38□□□□□ -0.11
ATL3-203ENST00000538786 HNF4AP41235 474 aa14.38□□□□□ -0.11
ATL3-203ENST00000538786 SEC13P55735 322 aa14.38□□□□□ -0.11
ATL3-203ENST00000538786 YBX1P67809 324 aaKnown RBP14.38□□□□□ -0.11
ATL3-203ENST00000538786 CDK3Q00526 305 aa14.38□□□□□ -0.11
ATL3-203ENST00000538786 DOC2AQ14183 400 aa14.38□□□□□ -0.11
ATL3-203ENST00000538786 OGFRL1Q5TC84 451 aaPredicted RBP14.38□□□□□ -0.11
ATL3-203ENST00000538786 LPCAT4Q643R3 524 aa14.38□□□□□ -0.11
ATL3-203ENST00000538786 NANOGP8Q6NSW7 305 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms