RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 RECQL5O94762 991 aaPredicted RBP12.16□□□□□ -0.46
USP3-203ENST00000538686 PRKAR1AP10644 381 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 C4BPBP20851 252 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 OR4D2P58180 307 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 DCDC1P59894 354 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 PSPHP78330 225 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 GBX1Q14549 363 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 GRM7Q14831 915 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 FUT11Q495W5 492 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 GLYR1Q49A26 553 aaPredicted RBP12.16□□□□□ -0.46
USP3-203ENST00000538686 FAM102BQ5T8I3 360 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 KIAA0319Q5VV43 1072 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 LRRC66Q68CR7 880 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 ARHGAP36Q6ZRI8 547 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 BNIPLQ7Z465 357 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 RAB44Q7Z6P3 723 aaPredicted RBP12.16□□□□□ -0.46
USP3-203ENST00000538686 ZZZ3Q8IYH5 903 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 GPR151Q8TDV0 419 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 KIAA1191Q96A73 305 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 LINC00052Q96N35 136 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 COL21A1Q96P44 957 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 QRFPRQ96P65 431 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 FAM129BQ96TA1 746 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 MNTQ99583 582 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 P2RY13Q9BPV8 354 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 MARVELD1Q9BSK0 173 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 OR51E2Q9H255 320 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 FBRSL1Q9HCM7 1045 aaKnown RBP12.16□□□□□ -0.46
USP3-203ENST00000538686 SDHAF2Q9NX18 166 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 SIRT5Q9NXA8 310 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 NDRG4Q9ULP0 352 aaKnown RBP12.16□□□□□ -0.46
USP3-203ENST00000538686 MGAT4AQ9UM21 535 aa12.16□□□□□ -0.46
USP3-203ENST00000538686 IQCMA0A1B0GVH7 501 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 SLC12A8A0AV02 714 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 MFSD2BA6NFX1 497 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 SLC30A4O14863 429 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 MUSKO15146 869 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 ATG7O95352 703 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 CSF3P09919 207 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 ARSBP15848 533 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 IL1RNP18510 177 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 CYP2F1P24903 491 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 KLRK1P26718 216 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 NRIP1P48552 1158 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 RORCP51449 518 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 CYP4F8P98187 520 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 STXBP2Q15833 593 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 KYAT1Q16773 422 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 TUSC1Q2TAM9 212 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 GPR33Q49SQ1 333 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 CES3Q6UWW8 571 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 GDPGP1Q6ZNW5 385 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 RTL4Q6ZR62 310 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 USP45Q70EL2 814 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 ZNF367Q7RTV3 350 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 TMPRSS9Q7Z410 1059 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 STX12Q86Y82 276 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 LRRC17Q8N6Y2 441 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 RDM1Q8NG50 284 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 C9orf43Q8TAL5 461 aaPredicted RBP12.15□□□□□ -0.46
USP3-203ENST00000538686 SLC13A3Q8WWT9 602 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 ASB12Q8WXK4 309 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 PDGFDQ9GZP0 370 aaPredicted RBP12.15□□□□□ -0.46
USP3-203ENST00000538686 RIBC2Q9H4K1 309 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 C8orf33Q9H7E9 229 aaPredicted RBP12.15□□□□□ -0.46
USP3-203ENST00000538686 CISHQ9NSE2 258 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 ACTR10Q9NZ32 417 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 PKP3Q9Y446 797 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 COL1A2P08123 1366 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 LINC00587B1AMM8 73 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 SIGLEC6O43699 453 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 MICAL2O94851 1124 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 HLA-DQB1P01920 261 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 FABP1P07148 127 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 NCF1P14598 390 aaPredicted RBP12.15□□□□□ -0.46
USP3-203ENST00000538686 KCNQ1P51787 676 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 BCAT1P54687 386 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 UBXN2AP68543 259 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 PRSS36Q5K4E3 855 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 FAM131AQ6UXB0 335 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 CYHR1Q6ZMK1 362 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 EIF3MQ7L2H7 374 aaKnown RBP12.15□□□□□ -0.46
USP3-203ENST00000538686 NLRP8Q86W28 1048 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 NIM1KQ8IY84 436 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 ABI1Q8IZP0 508 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 SLC37A3Q8NCC5 494 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 LPCAT1Q8NF37 534 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 ISG20Q96AZ6 181 aaKnown RBP12.15□□□□□ -0.46
USP3-203ENST00000538686 PIP5K1AQ99755 562 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 NIF3L1Q9GZT8 377 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 NT5DC2Q9H857 520 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 PPP1R14DQ9NXH3 145 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 KCTD5Q9NXV2 234 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 NDRG3Q9UGV2 375 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 PLCL2Q9UPR0 1127 aa12.15□□□□□ -0.46
USP3-203ENST00000538686 TAF1P21675 1872 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 COL4A1P02462 1669 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 C2CD4BA6NLJ0 364 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 A8MT66 165 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 HNRNPCL2B2RXH8 293 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms