RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ISLR2Q6UXK2 745 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 PIANPQ8IYJ0 282 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 TBC1D21Q8IYX1 336 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 C2orf73Q8N5S3 287 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 LMNTD1Q8N9Z9 388 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 OR11G2Q8NGC1 345 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 OR8K1Q8NGG5 319 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 OR1N1Q8NGS0 311 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 OR5K2Q8NHB8 316 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 CHP1Q99653 195 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 TBL1YQ9BQ87 522 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 MRM3Q9HC36 420 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 ZNHIT6Q9NWK9 470 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 CIDEBQ9UHD4 219 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 POLG2Q9UHN1 485 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 PRSS21Q9Y6M0 314 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 PCNX1Q96RV3 2341 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 HIVEP1P15822 2718 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 HEATR9A2RTY3 570 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 GOLGA6L19H0YKK7 550 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 KLHL18O94889 574 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 ZRANB2O95218 330 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 PIM1P11309 404 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 ACADLP28330 430 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 GRIA3P42263 894 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 GCGRP47871 477 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 ARSFP54793 590 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 CSE1LP55060 971 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 OTUD4Q01804 1114 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 KIR2DS3Q14952 304 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 ANKRD20A2Q5SQ80 823 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 CCDC181Q5TID7 509 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 ANKRD20A1Q5TYW2 823 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 ANKRD20A3Q5VUR7 823 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 FCRL6Q6DN72 434 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 DENND5AQ6IQ26 1287 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 GDF7Q7Z4P5 450 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 TAX1BP1Q86VP1 789 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 MCATQ8IVS2 390 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 KATNAL2Q8IYT4 538 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 DTWD1Q8N5C7 304 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 ITLN2Q8WWU7 325 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 CCDC42Q96M95 316 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 FAM118BQ9BPY3 351 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 NHEJ1Q9H9Q4 299 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 ZNF160Q9HCG1 818 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 CUTCQ9NTM9 273 aa13.43□□□□□ -0.26
SMARCA4-206ENST00000538456 BHMG1C9JSJ3 638 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 APOC4-APOC2K7ER74 178 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 DSCR3O14972 297 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 KCNN4O15554 427 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 AP2A2O94973 939 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 AP2A1O95782 977 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 APOC2P02655 101 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 ALBP02768 609 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 FTH1P02794 183 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 GSTM1P09488 218 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 PKLRP30613 574 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 OR1D4P47884 311 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 ARG2P78540 354 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 GSTM4Q03013 218 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 CACNG1Q06432 222 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 MFAP5Q13361 173 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 ART3Q13508 389 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 GFRALQ6UXV0 394 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 BBS12Q6ZW61 710 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 PRSS58Q8IYP2 241 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 RCOR2Q8IZ40 523 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 CCDC110Q8TBZ0 833 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 RELTQ969Z4 430 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 LURAP1Q96LR2 239 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 TAAR6Q96RI8 345 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 FERMT1Q9BQL6 677 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 CRB3Q9BUF7 120 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 SLC26A1Q9H2B4 701 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 SEMA3GQ9NS98 782 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 IMPACTQ9P2X3 320 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 NXT1Q9UKK6 140 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 ITGB1BP2Q9UKP3 347 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 ALG6Q9Y672 507 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 MAU2Q9Y6X3 613 aa13.42□□□□□ -0.26
SMARCA4-206ENST00000538456 ZFHX3Q15911 3703 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 TRGV8A0A0C4DH27 118 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 SYCE3A1L190 88 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 OR51F1A6NGY5 319 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 PCDH17O14917 1159 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 KDM1AO60341 852 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 STK10O94804 968 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 F10P00742 488 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 ACPPP15309 386 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 TPH1P17752 444 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 TDGF1P3P51864 188 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 SRSF11Q05519 484 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 POU6F1Q14863 301 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 TMTC1Q8IUR5 882 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 CDKL3Q8IVW4 592 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 LINC01555Q8NAE3 123 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 ACTL9Q8TC94 416 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 DENND1AQ8TEH3 1009 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms