RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 IFT46Q9NQC8 304 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 CAMTA1Q9Y6Y1 1673 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 A0A1W2PRG6 482 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 H0YGN5 161 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 NOS1APO75052 506 aaPredicted RBP16.48■□□□□ 0.23
SCARB1-205ENST00000538291 SCGNO76038 276 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 HADHBP55084 474 aaKnown RBP16.48■□□□□ 0.23
SCARB1-205ENST00000538291 NFKB2Q00653 900 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.48■□□□□ 0.233e-8■□□□□ 8.6
SCARB1-205ENST00000538291 CNTN3Q9P232 1028 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 A0A0J9YVX5 310 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 GJA1P17302 382 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 AP1S2P56377 157 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 CBR4Q8N4T8 237 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 TMEM109Q9BVC6 243 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 FARSBQ9NSD9 589 aaKnown RBP16.47■□□□□ 0.23
SCARB1-205ENST00000538291 MOCS1Q9NZB8 636 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 RAB26Q9ULW5 256 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 COQ4Q9Y3A0 265 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 GNB5O14775 395 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 HLA-DQB2P05538 268 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 S100A9P06702 114 aaKnown RBP16.47■□□□□ 0.23
SCARB1-205ENST00000538291 PUM1Q14671 1186 aaKnown RBP eCLIP16.47■□□□□ 0.233e-10■□□□□ 8.1
SCARB1-205ENST00000538291 ULK3Q6PHR2 472 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 USP30Q70CQ3 517 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 FAM13CQ8NE31 585 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 SLC25A36Q96CQ1 311 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 FAM234BA2RU67 622 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 WASHC1A8K0Z3 465 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 WASH3PC4AMC7 463 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 HAS3O00219 553 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 PFKMP08237 780 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 ALPIP09923 528 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 PRPS1L1P21108 318 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 SH3D19Q5HYK7 790 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 WASH2PQ6VEQ5 465 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 ADAM7Q9H2U9 754 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 TCF7L1Q9HCS4 588 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 CRTAC1Q9NQ79 661 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 A8MUA0 341 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 ACVR2AP27037 513 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 HCAR3P49019 387 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 TARDBPQ13148 414 aaKnown RBP eCLIP16.47■□□□□ 0.232e-6■■■■■ 38.5
SCARB1-205ENST00000538291 CBX3Q13185 183 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 NIPA2Q8N8Q9 360 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 SLC2A4RGQ9NR83 387 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 VPS29Q9UBQ0 182 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 MGAT4AQ9UM21 535 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 INPPL1O15357 1258 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 ERI3O43414 337 aaKnown RBP16.47■□□□□ 0.23
SCARB1-205ENST00000538291 AKAP8O43823 692 aaKnown RBP16.47■□□□□ 0.23
SCARB1-205ENST00000538291 UNGP13051 313 aaPredicted RBP16.47■□□□□ 0.23
SCARB1-205ENST00000538291 HOXB2P14652 356 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 IDH3AP50213 366 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 GDI2P50395 445 aaKnown RBP16.47■□□□□ 0.23
SCARB1-205ENST00000538291 CLCN4P51793 760 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 Q6ZVU0 165 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 OXR1Q8N573 874 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 SMPDL3AQ92484 453 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 IRF7Q92985 503 aa16.47■□□□□ 0.23
SCARB1-205ENST00000538291 PIGRP01833 764 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 ZNF30P17039 623 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 KLHL22Q53GT1 634 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 GKN2Q86XP6 184 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 CMTM7Q96FZ5 175 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 MGME1Q9BQP7 344 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 USP29Q9HBJ7 922 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 TVP23BQ9NYZ1 205 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 SRPRAP08240 638 aaKnown RBP16.46■□□□□ 0.23
SCARB1-205ENST00000538291 ERVK-8P63133 956 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 MYLK3Q32MK0 819 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 SH3PXD2AQ5TCZ1 1133 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 CCDC36Q8IYA8 594 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 TMEM156Q8N614 296 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 OR6K6Q8NGW6 343 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 SPATA7Q9P0W8 599 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 ZNF536O15090 1300 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 UPK3BL1B0FP48 263 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 UPK3BL2E5RIL1 263 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 PDCD5O14737 125 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 NIPSNAP2O75323 286 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 NCK1P16333 377 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 CSTF2P33240 577 aaKnown RBP eCLIP16.46■□□□□ 0.23
SCARB1-205ENST00000538291 NRIP1P48552 1158 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 GDF10P55107 478 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 NFATC2Q13469 925 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 WDR45BQ5MNZ6 344 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 ADNP2Q6IQ32 1131 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 PAQR3Q6TCH7 311 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 CCDC80Q76M96 950 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 LRRC70Q7Z2Q7 622 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 LYSMD3Q7Z3D4 306 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 CAND1Q86VP6 1230 aaKnown RBP16.46■□□□□ 0.23
SCARB1-205ENST00000538291 DENND1AQ8TEH3 1009 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 OVCA2Q8WZ82 227 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 DGCR14Q96DF8 476 aaKnown RBP16.46■□□□□ 0.23
SCARB1-205ENST00000538291 TRIM39Q9HCM9 518 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 MRC1P22897 1456 aa16.46■□□□□ 0.23
SCARB1-205ENST00000538291 TEX46H3BTG2 121 aa16.46■□□□□ 0.22
SCARB1-205ENST00000538291 CHP2O43745 196 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms