RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 RPL10P27635 214 aaKnown RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 PBLDP30039 288 aaPredicted RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 STIP1P31948 543 aaKnown RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 FDFT1P37268 417 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 KIR3DL1P43629 444 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 CAPZBP47756 277 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 DRG2P55039 364 aaKnown RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 GFERP55789 205 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 CCZ1BP86790 482 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 CCZ1P86791 482 aaPredicted RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 RHDQ02161 417 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 PLP2Q04941 152 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 GPR18Q14330 331 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 NFE2L1Q14494 772 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 POU6F1Q14863 301 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 CLCA4Q14CN2 919 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 SIX1Q15475 284 aaPredicted RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 TGIF1Q15583 401 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 GPR33Q49SQ1 333 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 FNBP1LQ5T0N5 605 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 ARHGAP40Q5TG30 622 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 INO80CQ6PI98 192 aaPredicted RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 FAM83HQ6ZRV2 1179 aaPredicted RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 DET1Q7L5Y6 550 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 SNX20Q7Z614 316 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 ZFAND4Q86XD8 727 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 FAM129CQ86XR2 697 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 PLXDC1Q8IUK5 500 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 LRRC8AQ8IWT6 810 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 BMPERQ8N8U9 685 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 GPR150Q8NGU9 434 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 HM13Q8TCT9 377 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 STYXQ8WUJ0 223 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 HEXDCQ8WVB3 486 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 KLHL6Q8WZ60 621 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 DACT3Q96B18 629 aaPredicted RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 DCUN1D1Q96GG9 259 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 COX4I2Q96KJ9 171 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 SIGLEC10Q96LC7 697 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 LINC00615Q96LM1 132 aaPredicted RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 TAAR9Q96RI9 348 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 COPS8Q99627 209 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 DDA1Q9BW61 102 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 PIF1Q9H611 641 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 ASB8Q9H765 288 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 SLC40A1Q9NP59 571 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 LZTFL1Q9NQ48 299 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 NLE1Q9NVX2 485 aaPredicted RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 SIDT1Q9NXL6 827 aaKnown RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 SLC39A1Q9NY26 324 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 OGFRQ9NZT2 677 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 WDR37Q9Y2I8 494 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 B3GALT1Q9Y5Z6 326 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 SLC30A1Q9Y6M5 507 aa6.87□□□□□ -1.31
YBX3-206ENST00000536823 FLNBO75369 2602 aaKnown RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 RP1L1Q8IWN7 2480 aaPredicted RBP6.87□□□□□ -1.31
YBX3-206ENST00000536823 FITM1A5D6W6 292 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 MROH6A6NGR9 719 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 A8MU76 341 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 STMND1H3BQB6 276 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 CLEC3AO75596 197 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 UBXN7O94888 489 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 SUN1O94901 812 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 MTHFD1P11586 935 aaKnown RBP6.86□□□□□ -1.31
YBX3-206ENST00000536823 TYRP1P17643 537 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 AMD1P17707 334 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 TPH1P17752 444 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 ACRV1P26436 265 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 MC4RP32245 332 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 PRLHRP49683 370 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 TMPRSS15P98073 1019 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 MC2RQ01718 297 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 CDH17Q12864 832 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 SEMA5AQ13591 1074 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 RPE65Q16518 533 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 ZRANB3Q5FWF4 1079 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 METRNLQ641Q3 311 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 DRICH1Q6PGQ1 229 aaPredicted RBP6.86□□□□□ -1.31
YBX3-206ENST00000536823 MICALCLQ6ZW33 695 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 PRSS42Q7Z5A4 293 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 LINC00523Q86TU6 105 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 VASH2Q86V25 355 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 PIANPQ8IYJ0 282 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 LSM14AQ8ND56 463 aaKnown RBP6.86□□□□□ -1.31
YBX3-206ENST00000536823 TRIM58Q8NG06 486 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 OR52K1Q8NGK4 314 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 OR2L2Q8NH16 312 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 NAT14Q8WUY8 206 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 MAIP1Q8WWC4 291 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 C1orf54Q8WWF1 131 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 RSC1A1Q92681 617 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 ZNF669Q96BR6 464 aaPredicted RBP6.86□□□□□ -1.31
YBX3-206ENST00000536823 SGF29Q96ES7 293 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 C9orf72Q96LT7 481 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 RMDN2Q96LZ7 410 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 TGM7Q96PF1 710 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 TEFMQ96QE5 360 aaKnown RBP6.86□□□□□ -1.31
YBX3-206ENST00000536823 TLR10Q9BXR5 811 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 ASPSCR1Q9BZE9 553 aa6.86□□□□□ -1.31
YBX3-206ENST00000536823 PIH1D1Q9NWS0 290 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms