RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 RSL1D1O76021 490 aaKnown RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 ARIH2O95376 493 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 JUNP05412 331 aaKnown RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 GAAP10253 952 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 ERVK-10P10266 1014 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 CKMT2P17540 419 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 NELFEP18615 380 aaKnown RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 ITIH1P19827 911 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 CYP2B6P20813 491 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 IMPDH1P20839 514 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 CTGFP29279 349 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 HPCAL1P37235 193 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 GPD2P43304 727 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 PTPN9P43378 593 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 PRIM2P49643 509 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 CPT1AP50416 773 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 TKTL1P51854 596 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 SLC7A2P52569 658 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 ZNF135P52742 658 aaPredicted RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 PPP5CP53041 499 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 ATXN3P54252 364 aaPredicted RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 EEFSECP57772 596 aaKnown RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 RAC3P60763 192 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 TFAMQ00059 246 aaKnown RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 ECT2LQ008S8 904 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 PRKCEQ02156 737 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 TNFAIP2Q03169 654 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 ARHGAP1Q07960 439 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 NSUN2Q08J23 767 aaKnown RBP eCLIP6.47□□□□□ -1.37
USP28-202ENST00000535607 GRIK2Q13002 908 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 NME3Q13232 169 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 MXD4Q14582 209 aaPredicted RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 ACOX1Q15067 660 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 DPYSL2Q16555 572 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 UGCGQ16739 394 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 KIF19Q2TAC6 998 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 CCDC157Q569K6 752 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 PPP6R3Q5H9R7 873 aaPredicted RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 AGAP9Q5VTM2 703 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 FAM160B1Q5W0V3 765 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 NAPEPLDQ6IQ20 393 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 ZNF544Q6NX49 715 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 ERAP2Q6P179 960 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 ABHD15Q6UXT9 468 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 LARP4Q71RC2 724 aaKnown RBP eCLIP6.47□□□□□ -1.37
USP28-202ENST00000535607 TAS1R1Q7RTX1 841 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 KCNMB4Q86W47 210 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 TCEAL8Q8IYN2 117 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 MPP5Q8N3R9 675 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 SVOPLQ8N434 492 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 PQLC3Q8N755 202 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 EMC1Q8N766 993 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 CCNYL1Q8N7R7 359 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 PAPD5Q8NDF8 572 aaKnown RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 SETD9Q8NE22 299 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 OR7G1Q8NGA0 311 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 OR5B17Q8NGF7 314 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 CD99L2Q8TCZ2 262 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 AGR3Q8TD06 166 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 MAPK15Q8TD08 544 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 PHF10Q8WUB8 498 aaKnown RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 ZNF480Q8WV37 535 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 CANT1Q8WVQ1 401 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 SEPT1Q8WYJ6 367 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 TFAP2BQ92481 460 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 TRIB2Q92519 343 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 VPS33AQ96AX1 596 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 SLCO4A1Q96BD0 722 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 FBXL8Q96CD0 374 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 ZNF486Q96H40 463 aaPredicted RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 MED30Q96HR3 178 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 VPS39Q96JC1 886 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 GPR22Q99680 433 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 FDXACB1Q9BRP7 624 aaPredicted RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 SOX7Q9BT81 388 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 ARHGAP39Q9C0H5 1083 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 MTMR12Q9C0I1 747 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 PCDHAC1Q9H158 963 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 SLC6A15Q9H2J7 730 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 ADNPQ9H2P0 1102 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 DHX35Q9H5Z1 703 aaKnown RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 ARMC7Q9H6L4 198 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 PLAC1Q9HBJ0 212 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 CCNB1IP1Q9NPC3 277 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 AKIP1Q9NQ31 210 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 CCDC177Q9NQR7 707 aaPredicted RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 QPCTLQ9NXS2 382 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 SCN3BQ9NY72 215 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 CRNNQ9UBG3 495 aaPredicted RBP6.47□□□□□ -1.37
USP28-202ENST00000535607 ENPP5Q9UJA9 477 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 PACSIN3Q9UKS6 424 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 SLC39A10Q9ULF5 831 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 VANGL2Q9ULK5 521 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 PDE10AQ9Y233 779 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 TPRKBQ9Y3C4 175 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 TESMINQ9Y4I5 508 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 CROCCQ5TZA2 2017 aa6.47□□□□□ -1.37
USP28-202ENST00000535607 FRMPD3Q5JV73 1810 aa6.46□□□□□ -1.37
USP28-202ENST00000535607 CCDC78A2IDD5 438 aa6.46□□□□□ -1.38
USP28-202ENST00000535607 PRORSD1PA6NEY8 169 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms