RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 RHOXF2Q9BQY4 288 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 ASPSCR1Q9BZE9 553 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 TSPYL1Q9H0U9 437 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 NINJ2Q9NZG7 142 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 SPATA7Q9P0W8 599 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 BTRCQ9Y297 605 aa21.97■■□□□ 1.11
SFSWAP-204ENST00000535399 ZZEF1O43149 2961 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 POLR1CO15160 346 aaPredicted RBP21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 EBLN1P0CF75 366 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 ERGP11308 486 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 PVRP15151 417 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 GP5P40197 560 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 TAS2R39P59534 338 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 FOXM1Q08050 763 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 ILF2Q12905 390 aaKnown RBP21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 PDAP1Q13442 181 aaKnown RBP21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 CYP2A13Q16696 494 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 LRRC8EQ6NSJ5 796 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 CEACAM20Q6UY09 585 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 ZFAND4Q86XD8 727 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 IFT20Q8IY31 132 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 HMGCLL1Q8TB92 370 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 LINGO1Q96FE5 620 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 NAF1Q96HR8 494 aaKnown RBP21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 DCBLD2Q96PD2 775 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 TEFMQ96QE5 360 aaKnown RBP21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 OR6C1Q96RD1 312 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 PKP4Q99569 1192 aa21.96■■□□□ 1.11
SFSWAP-204ENST00000535399 ISM1B1AKI9 464 aa21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 PRICKLE3O43900 615 aaPredicted RBP21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 CD82P27701 267 aa21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 ARL4DP49703 201 aa21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 IL11RAQ14626 422 aa21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 SLC5A12Q1EHB4 618 aa21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 TMEM207Q6UWW9 146 aa21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 TAX1BP1Q86VP1 789 aa21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 CTAGE3PQ8IX95 158 aa21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 PPM1NQ8N819 430 aa21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 DLG3Q92796 817 aa21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 ZPBPQ9BS86 351 aa21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 KLHL25Q9H0H3 589 aa21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 MTO1Q9Y2Z2 717 aaKnown RBP21.95■■□□□ 1.1
SFSWAP-204ENST00000535399 A0A0J9YY10 115 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 ESPNB1AK53 854 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 RRP8O43159 456 aaKnown RBP21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 SAT1P21673 171 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 IL2P60568 153 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 ACY1Q03154 408 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 CLN3Q13286 438 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 NAB1Q13506 487 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 FASTKQ14296 549 aaKnown RBP21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 EFTUD2Q15029 972 aaKnown RBP eCLIP21.94■■□□□ 1.13e-6■■□□□ 11.7
SFSWAP-204ENST00000535399 UBE2R2Q712K3 238 aaPredicted RBP21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 RAB42Q8N4Z0 105 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 KCNE4Q8WWG9 221 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 RBBP8Q99708 897 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 SPRY4Q9C004 299 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 CDC42EP4Q9H3Q1 356 aaKnown RBP21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 SOHLH2Q9NX45 425 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 TXNDC16Q9P2K2 825 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 LNPEPQ9UIQ6 1025 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 ADAMTS6Q9UKP5 1117 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 NFU1Q9UMS0 254 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 PCDHB11Q9Y5F2 797 aa21.94■■□□□ 1.1
SFSWAP-204ENST00000535399 A0A1W2PPV9 198 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 LAMA5O15230 3695 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 ZBTB14O43829 449 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 FGF5P12034 268 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 TUBB3Q13509 450 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 ZNF460Q14592 562 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 ARHGAP19Q14CB8 494 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 ZIC1Q15915 447 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 PKD1L2Q7Z442 2459 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 DTX1Q86Y01 620 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 CEP97Q8IW35 865 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 SPACA3Q8IXA5 215 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 FAM20CQ8IXL6 584 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 MYO1HQ8N1T3 1032 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 SLC22A18Q96BI1 424 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 GPR22Q99680 433 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 SLC12A9Q9BXP2 914 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 FGF21Q9NSA1 209 aa21.93■■□□□ 1.1
SFSWAP-204ENST00000535399 FAM155BO75949 473 aa21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 SLC16A8O95907 504 aa21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 C8GP07360 202 aa21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 ZNF37AP17032 561 aaPredicted RBP21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 MAP4P27816 1152 aaKnown RBP21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 POU4F1Q01851 419 aa21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 TMTC4Q5T4D3 741 aa21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 GRTP1Q5TC63 336 aa21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 C19orf47Q8N9M1 422 aaKnown RBP21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 PDLIM5Q96HC4 596 aaKnown RBP21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 FUT8Q9BYC5 575 aa21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 DPH1Q9BZG8 443 aa21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 PDE7BQ9NP56 450 aa21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 RARRES3Q9UL19 164 aa21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 PDE10AQ9Y233 779 aa21.92■■□□□ 1.1
SFSWAP-204ENST00000535399 STMND1H3BQB6 276 aa21.91■■□□□ 1.1
SFSWAP-204ENST00000535399 SLC16A5O15375 505 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms