RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ZNF542PQ5EBM4 170 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 AGAP9Q5VTM2 703 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 BORAQ6PGQ7 559 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 IL27RAQ6UWB1 636 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 WASH2PQ6VEQ5 465 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 B3GNT6Q6ZMB0 384 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 CYHR1Q6ZMK1 362 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 NRROSQ86YC3 692 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 TREML1Q86YW5 311 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 CPNE9Q8IYJ1 553 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 FSTL5Q8N475 847 aaPredicted RBP12□□□□□ -0.49
SCARB1-204ENST00000535005 MARVELD2Q8N4S9 558 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 EEF1AKMT1Q8WVE0 214 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 ANKRD49Q8WVL7 239 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 PRR11Q96HE9 360 aaPredicted RBP12□□□□□ -0.49
SCARB1-204ENST00000535005 CATSPER2Q96P56 530 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 ELF4Q99607 663 aaPredicted RBP12□□□□□ -0.49
SCARB1-204ENST00000535005 GSDMCQ9BYG8 508 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 ARRDC1-AS1Q9H2J1 176 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 WASH6PQ9NQA3 447 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 SPASTQ9UBP0 616 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 APOBEC3BQ9UH17 382 aaKnown RBP12□□□□□ -0.49
SCARB1-204ENST00000535005 PCOLCE2Q9UKZ9 415 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 PADI4Q9UM07 663 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 WDFY4Q6ZS81 3184 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 ARHGAP10A1A4S6 786 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 DENRO43583 198 aaKnown RBP11.99□□□□□ -0.49
SCARB1-204ENST00000535005 CTSEP14091 401 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 IDSP22304 550 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 HSPA13P48723 471 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 ATP6V0D1P61421 351 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 GRIK2Q13002 908 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 ELOCQ15369 112 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 TRIM61Q5EBN2 209 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 PGM2L1Q6PCE3 622 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 ABRAXAS1Q6UWZ7 409 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 NAPRTQ6XQN6 538 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 ALYREFQ86V81 257 aaKnown RBP11.99□□□□□ -0.49
SCARB1-204ENST00000535005 RASGRP3Q8IV61 690 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 VRK3Q8IV63 474 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 CENPLQ8N0S6 344 aaPredicted RBP11.99□□□□□ -0.49
SCARB1-204ENST00000535005 LILRA3Q8N6C8 439 aaPredicted RBP11.99□□□□□ -0.49
SCARB1-204ENST00000535005 ACTRT2Q8TDY3 377 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 LINGO1Q96FE5 620 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 LRRC61Q9BV99 259 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 DERL2Q9GZP9 239 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 OR52A5Q9H2C5 316 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 THAP1Q9NVV9 213 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 C6orf203Q9P0P8 240 aaPredicted RBP11.99□□□□□ -0.49
SCARB1-204ENST00000535005 ARMCX1Q9P291 453 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 DCDC2Q9UHG0 476 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 KCNK6Q9Y257 313 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 DNAJC16Q9Y2G8 782 aa11.99□□□□□ -0.49
SCARB1-204ENST00000535005 PI4KAP42356 2102 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 A0A088AWK7 358 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 A0A1B0GVG6 124 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 GOLGA8RI6L899 631 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 CFIP05156 583 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 SYPP08247 313 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 LTA4HP09960 611 aaKnown RBP11.98□□□□□ -0.49
SCARB1-204ENST00000535005 ACADLP28330 430 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 PDHA2P29803 388 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 CRHR1P34998 444 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 PREPP48147 710 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 ARRB1P49407 418 aaPredicted RBP11.98□□□□□ -0.49
SCARB1-204ENST00000535005 BST1Q10588 318 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 DLG1Q12959 904 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 MYBPC3Q14896 1274 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 PDK3Q15120 406 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 FAM83EQ2M2I3 478 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 SPNS2Q8IVW8 549 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 WDR75Q8IWA0 830 aaKnown RBP11.98□□□□□ -0.49
SCARB1-204ENST00000535005 CCL4L1Q8NHW4 92 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 ATOH1Q92858 354 aaPredicted RBP11.98□□□□□ -0.49
SCARB1-204ENST00000535005 GPR78Q96P69 363 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 MRPS26Q9BYN8 205 aaKnown RBP11.98□□□□□ -0.49
SCARB1-204ENST00000535005 NMRAL1Q9HBL8 299 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 IGSF5Q9NSI5 407 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 BCAP29Q9UHQ4 241 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 CSNK1G3Q9Y6M4 447 aa11.98□□□□□ -0.49
SCARB1-204ENST00000535005 A0A1B0GTQ1 180 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 A6NCN8 305 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 PATE3B3GLJ2 98 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 ARHGAP33O14559 1287 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 KHNYNO15037 678 aaKnown RBP11.97□□□□□ -0.49
SCARB1-204ENST00000535005 SCAMP1O15126 338 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 YKT6O15498 198 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 GLRA3O75311 464 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 PIAS2O75928 621 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 MATN4O95460 622 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 CD1DP15813 335 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 AK4P27144 223 aaPredicted RBP11.97□□□□□ -0.49
SCARB1-204ENST00000535005 GMPRP36959 345 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 ACTR1BP42025 376 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 MAPK9P45984 424 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 ACTR1AP61163 376 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 IRF9Q00978 393 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 SHBQ15464 509 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 HLA-BQ31612 363 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 MMEL1Q495T6 779 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms