RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CHRNA4P43681 627 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 GSCP56915 257 aaPredicted RBP11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 CCINQ13939 588 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 GPRC6AQ5T6X5 926 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 FAM92BQ6ZTR7 304 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 EIF3MQ7L2H7 374 aaKnown RBP11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC30A8Q8IWU4 369 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 NXPE1Q8N323 547 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 ADCY4Q8NFM4 1077 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 HERPUD2Q9BSE4 406 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 TAPBPLQ9BX59 468 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC29A3Q9BZD2 475 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 GPR34Q9UPC5 381 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 PADI2Q9Y2J8 665 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 DGKBQ9Y6T7 804 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 DUXAA6NLW8 204 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 BTN3A3O00478 584 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 UGT1A9O60656 530 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 SEMA3DO95025 777 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 MYL12AP19105 171 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 UGT1A6P19224 532 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 UGT1A1P22309 533 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 UGT1A4P22310 534 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 UGT1A3P35503 534 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 UGT1A5P35504 534 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 GRIA3P42263 894 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 TNFRSF4P43489 277 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 ACTR3P61158 418 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 MTAPQ13126 283 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 TDGQ13569 410 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 HTR3DQ70Z44 454 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 LDB1Q86U70 411 aaPredicted RBP11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 PQLC1Q8N2U9 271 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 ZNF276Q8N554 614 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 BPIFB6Q8NFQ5 453 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 FGF13Q92913 245 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 SHISA4Q96DD7 197 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 KCNS3Q9BQ31 491 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 RTP3Q9BQQ7 232 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 RSPH9Q9H1X1 276 aaPredicted RBP11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 MUC13Q9H3R2 512 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 UGT1A7Q9HAW7 530 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 UGT1A10Q9HAW8 530 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 UGT1A8Q9HAW9 530 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 POPDC3Q9HBV1 291 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 LINC01553A4QN01 128 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 FAM170BA6NMN3 283 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 TRIM38O00635 465 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 LSM3P62310 102 aaKnown RBP11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 ANKRD54Q6NXT1 300 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 PROSER1Q86XN7 944 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 SPATA6LQ8N4H0 392 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 DDX1Q92499 740 aaKnown RBP11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 GLYATL1Q969I3 302 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 C1orf109Q9NX04 203 aa11.03□□□□□ -0.64
AMBRA1-211ENST00000533727 GSC2O15499 205 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 FFAR2O15552 330 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 METTL18O95568 372 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 IFNGP01579 166 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 SERPINA6P08185 405 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 DBTP11182 482 aaKnown RBP11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 ADSLP30566 484 aaPredicted RBP11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 HOXC12P31275 282 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 GSSP48637 474 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 TAS2R39P59534 338 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 NFATC2Q13469 925 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 ARHGAP40Q5TG30 622 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 GCNT7Q6ZNI0 430 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 EPHX4Q8IUS5 362 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 TWIST2Q8WVJ9 160 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 TSSK3Q96PN8 268 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 NECTIN3Q9NQS3 549 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 APOBEC3BQ9UH17 382 aaKnown RBP11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 MAGEL2Q9UJ55 1249 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 FBXW2Q9UKT8 454 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 PRPF19Q9UMS4 504 aaKnown RBP11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 ING4Q9UNL4 249 aa11.02□□□□□ -0.64
AMBRA1-211ENST00000533727 PSMD11O00231 422 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 MYL12BO14950 172 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 SLC16A5O15375 505 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 COQ9O75208 318 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 NADKO95544 446 aaPredicted RBP11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 PRKCGP05129 697 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 LAMP2P13473 410 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 CEBPBP17676 345 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 RPL4P36578 427 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 UGT2B15P54855 530 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 PSME3P61289 254 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 ABATP80404 500 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 CREB5Q02930 508 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 C14orf80Q86SX3 495 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 NCSTNQ92542 709 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 C5orf34Q96MH7 638 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 Q96MT0 163 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 FIZ1Q96SL8 496 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 RACGAP1Q9H0H5 632 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 KCNH6Q9H252 994 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 C3orf18Q9UK00 162 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 WBP11Q9Y2W2 641 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 CLCA3PQ9Y6N3 262 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms