RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-214ENST00000533632 SPTBN2O15020 2390 aa13.05□□□□□ -0.32
TRAPPC4-214ENST00000533632 SYCE1LA8MT33 242 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 B4DGG1 531 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 YKT6O15498 198 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 SH3BP5O60239 455 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 NOBOXO60393 691 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 SMIM24O75264 130 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 RCN2Q14257 317 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 LACTB2Q53H82 288 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 MBOAT1Q6ZNC8 495 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 GKN2Q86XP6 184 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 ZDHHC1Q8WTX9 485 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 CNDP1Q96KN2 507 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 LRRC37BQ96QE4 947 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 TRMOQ9BU70 441 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 C20orf27Q9GZN8 174 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 ILKAPQ9H0C8 392 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 IMP3Q9NV31 184 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 HAO1Q9UJM8 370 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 PDE10AQ9Y233 779 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 ASF1AQ9Y294 204 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 A0A0G2JND7 137 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 SLCO1B7G3V0H7 640 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 TRIM38O00635 465 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 ITM2AO43736 263 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 C1orf105O95561 183 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 HSPA4LO95757 839 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 MTHFD1P11586 935 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 MTHFD2P13995 350 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 SLC19A1P41440 591 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 NAGLUP54802 743 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 GALNT1Q10472 559 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 PRKAA1Q13131 559 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 GRB7Q14451 532 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 UBE2R2Q712K3 238 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 NAXDQ8IW45 347 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 SFRP1Q8N474 314 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 RFWD2Q8NHY2 731 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 SLC37A2Q8TED4 501 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 SORT1Q99523 831 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 SLC12A9Q9BXP2 914 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 KCNK13Q9HB14 408 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 UTP6Q9NYH9 597 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 DCTN4Q9UJW0 460 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 CDV3Q9UKY7 258 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 RAP2CQ9Y3L5 183 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 CSNK1G3Q9Y6M4 447 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 ASXL3Q9C0F0 2248 aa13.04□□□□□ -0.32
TRAPPC4-214ENST00000533632 NEMP2A6NFY4 417 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 UBXN8O00124 270 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 IFRD1O00458 451 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 KERAO60938 352 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 C8GP07360 202 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 ANXA6P08133 673 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 ALOX15P16050 662 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 MAZP56270 477 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 UBE2IP63279 158 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 SF3A3Q12874 501 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 PRKG2Q13237 762 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 SP140Q13342 867 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 ZXDCQ2QGD7 858 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 CFAP157Q5JU67 520 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 UNC5DQ6UXZ4 953 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 RAB44Q7Z6P3 723 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 ADAMTSL2Q86TH1 951 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 LMNTD1Q8N9Z9 388 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 KYQ8NBH2 561 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 OR5K2Q8NHB8 316 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 STON2Q8WXE9 905 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 EXT2Q93063 718 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 HGH1Q9BTY7 390 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 TMEM120AQ9BXJ8 343 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 ACTR5Q9H9F9 607 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 EML4Q9HC35 981 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 DOLKQ9UPQ8 538 aa13.03□□□□□ -0.32
TRAPPC4-214ENST00000533632 CACNA1AO00555 2505 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 RP1P56715 2156 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 LY6G6EA0A0G2JKS1 128 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 A8MT66 165 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 FLRT2O43155 660 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 MYF5P13349 255 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 IMPDH1P20839 514 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 HALP42357 657 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 TGFBIQ15582 683 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 C6orf132Q5T0Z8 1188 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 OGFOD3Q6PK18 319 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 C17orf82Q86X59 251 aaPredicted RBP13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 SDR16C5Q8N3Y7 309 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 DEFB124Q8NES8 71 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 JPH3Q8WXH2 748 aaPredicted RBP13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 L3HYPDHQ96EM0 354 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 THOC1Q96FV9 657 aaKnown RBP13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 MENTQ9BUN1 341 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 PARVBQ9HBI1 364 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 VTI1BQ9UEU0 232 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 RNF112Q9ULX5 631 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 PLAGL1Q9UM63 463 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 OARD1Q9Y530 152 aa13.02□□□□□ -0.32
TRAPPC4-214ENST00000533632 U3KQA8 63 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms